Gene Mbar_A0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0897 
Symbol 
ID3625942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1080464 
End bp1081768 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content50% 
IMG OID637699784 
Productmethyl-coenzyme M reductase, beta subunit 
Protein accessionYP_304451 
Protein GI73668436 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4054] Methyl coenzyme M reductase, beta subunit 
TIGRFAM ID[TIGR03257] methyl-coenzyme M reductase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGACA CAGTAGACAT CTACGACGAC AGAGGAAAAC TGCTCGAGAG CAATGTCGAC 
ATTATGAGCC TTGCTCCAAC AAGAAACGCA GCAATTCAAT CGATCATCAT GGACACTAAG
AGGTCAGTTG CAGTCAACCT CGCAGGTATT CAGGGTGCAC TTGCCAGCGG CAAGATGGGC
GGAAAGGGCC GTCAAATCTT AGGCCGCGGA CTTAACTATG ACATTGTAGG CAATGCTGAT
GCAATTGCAG AAAATGTTAA AAAACTCGTC CAGGTCGATG AAGGCGACGA TACCAATGTT
ATCAAAGTCA AAGGCGGAAA GAGCCTCTTG ATCCAGTCCC CCAAATCCAG GATTATTGCA
GGCGCCGACT TCATGTCCGC AACAACAGTT GGTGCAGCAG CAGTCACCCA GACTATTATG
GACATGTTTG GAACTGATCC TTATGATGCT CCTATCGTAA AATCAGCTGT CTGGGGAAGC
TACCCACAGA CAATGGATCT CATGGGAGGT CAGGTTCAGG GTATTCTCAG CATCCCCCAG
AACAATGAAG GTCTTGGCTT TTCCCTCAGG AACATTATGG CCAACCACGT TGCAGCAATC
TCCAACCGGA ATGCAATGAA CGCATCAGCT CTCTCTTCCA TCTACGAGCA GTCTGGTATC
TTCGAGATGG GTGGAGCAGT CGGCATGTTC GAGAGGCATC AGCTCCTCGG TCTTGCATAC
CAGGGTCTCA ACGCCAACAA CCTCTTATAT GACATTGTTA AGGAAAACGG TAAGGATGGA
ACCATTGGAA CCGTTATCGA ATCCGTTGTC CGCAGGGCGA TTGAAGCTGG TATTATCTCC
GTTGACAAGA CCGCTCCTTC TGGATACAAC TTCTATAAAG CAAACGACGT CCCCAAGTGG
AATGCCTGTG CAGCAGTCGG TACTCTTGCA GCCACTCTTG TGAACTGTGG TGCAGGCCGT
GCAGCTCAGA ACGTTTCCTC AACACTTCTC TACTTCAATG ATATCCTTGA GAAGGAAACT
GGTCTCCCGG GATGTGACTA CGGTAAAGTA GAAGGTACCG CGGTAGGGTT CTCATTCTTC
AGCCACTCCA TTTATGGTGG CGGTGGGCCT GGTGTCTTCA ACGGTAACCA CGTCGTTACC
AGACACTCCA GAGGATTCGC AATCCCCTGT GTATGCGCAG CAGTCGCTCT TGATGCAGGT
ACCCAGATGT TCTCAATCGA ATCAACATCC GGCCTGATAG GTGACGTGTT TGGTGCAATA
CCAGAATTCC GCGAGCCGAT TAAGGCAGTT GCAGGAGTGC TCTAA
 
Protein sequence
MSDTVDIYDD RGKLLESNVD IMSLAPTRNA AIQSIIMDTK RSVAVNLAGI QGALASGKMG 
GKGRQILGRG LNYDIVGNAD AIAENVKKLV QVDEGDDTNV IKVKGGKSLL IQSPKSRIIA
GADFMSATTV GAAAVTQTIM DMFGTDPYDA PIVKSAVWGS YPQTMDLMGG QVQGILSIPQ
NNEGLGFSLR NIMANHVAAI SNRNAMNASA LSSIYEQSGI FEMGGAVGMF ERHQLLGLAY
QGLNANNLLY DIVKENGKDG TIGTVIESVV RRAIEAGIIS VDKTAPSGYN FYKANDVPKW
NACAAVGTLA ATLVNCGAGR AAQNVSSTLL YFNDILEKET GLPGCDYGKV EGTAVGFSFF
SHSIYGGGGP GVFNGNHVVT RHSRGFAIPC VCAAVALDAG TQMFSIESTS GLIGDVFGAI
PEFREPIKAV AGVL