Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0897 |
Symbol | |
ID | 3625942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1080464 |
End bp | 1081768 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637699784 |
Product | methyl-coenzyme M reductase, beta subunit |
Protein accession | YP_304451 |
Protein GI | 73668436 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4054] Methyl coenzyme M reductase, beta subunit |
TIGRFAM ID | [TIGR03257] methyl-coenzyme M reductase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTGACA CAGTAGACAT CTACGACGAC AGAGGAAAAC TGCTCGAGAG CAATGTCGAC ATTATGAGCC TTGCTCCAAC AAGAAACGCA GCAATTCAAT CGATCATCAT GGACACTAAG AGGTCAGTTG CAGTCAACCT CGCAGGTATT CAGGGTGCAC TTGCCAGCGG CAAGATGGGC GGAAAGGGCC GTCAAATCTT AGGCCGCGGA CTTAACTATG ACATTGTAGG CAATGCTGAT GCAATTGCAG AAAATGTTAA AAAACTCGTC CAGGTCGATG AAGGCGACGA TACCAATGTT ATCAAAGTCA AAGGCGGAAA GAGCCTCTTG ATCCAGTCCC CCAAATCCAG GATTATTGCA GGCGCCGACT TCATGTCCGC AACAACAGTT GGTGCAGCAG CAGTCACCCA GACTATTATG GACATGTTTG GAACTGATCC TTATGATGCT CCTATCGTAA AATCAGCTGT CTGGGGAAGC TACCCACAGA CAATGGATCT CATGGGAGGT CAGGTTCAGG GTATTCTCAG CATCCCCCAG AACAATGAAG GTCTTGGCTT TTCCCTCAGG AACATTATGG CCAACCACGT TGCAGCAATC TCCAACCGGA ATGCAATGAA CGCATCAGCT CTCTCTTCCA TCTACGAGCA GTCTGGTATC TTCGAGATGG GTGGAGCAGT CGGCATGTTC GAGAGGCATC AGCTCCTCGG TCTTGCATAC CAGGGTCTCA ACGCCAACAA CCTCTTATAT GACATTGTTA AGGAAAACGG TAAGGATGGA ACCATTGGAA CCGTTATCGA ATCCGTTGTC CGCAGGGCGA TTGAAGCTGG TATTATCTCC GTTGACAAGA CCGCTCCTTC TGGATACAAC TTCTATAAAG CAAACGACGT CCCCAAGTGG AATGCCTGTG CAGCAGTCGG TACTCTTGCA GCCACTCTTG TGAACTGTGG TGCAGGCCGT GCAGCTCAGA ACGTTTCCTC AACACTTCTC TACTTCAATG ATATCCTTGA GAAGGAAACT GGTCTCCCGG GATGTGACTA CGGTAAAGTA GAAGGTACCG CGGTAGGGTT CTCATTCTTC AGCCACTCCA TTTATGGTGG CGGTGGGCCT GGTGTCTTCA ACGGTAACCA CGTCGTTACC AGACACTCCA GAGGATTCGC AATCCCCTGT GTATGCGCAG CAGTCGCTCT TGATGCAGGT ACCCAGATGT TCTCAATCGA ATCAACATCC GGCCTGATAG GTGACGTGTT TGGTGCAATA CCAGAATTCC GCGAGCCGAT TAAGGCAGTT GCAGGAGTGC TCTAA
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Protein sequence | MSDTVDIYDD RGKLLESNVD IMSLAPTRNA AIQSIIMDTK RSVAVNLAGI QGALASGKMG GKGRQILGRG LNYDIVGNAD AIAENVKKLV QVDEGDDTNV IKVKGGKSLL IQSPKSRIIA GADFMSATTV GAAAVTQTIM DMFGTDPYDA PIVKSAVWGS YPQTMDLMGG QVQGILSIPQ NNEGLGFSLR NIMANHVAAI SNRNAMNASA LSSIYEQSGI FEMGGAVGMF ERHQLLGLAY QGLNANNLLY DIVKENGKDG TIGTVIESVV RRAIEAGIIS VDKTAPSGYN FYKANDVPKW NACAAVGTLA ATLVNCGAGR AAQNVSSTLL YFNDILEKET GLPGCDYGKV EGTAVGFSFF SHSIYGGGGP GVFNGNHVVT RHSRGFAIPC VCAAVALDAG TQMFSIESTS GLIGDVFGAI PEFREPIKAV AGVL
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