Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0893 |
Symbol | |
ID | 3625938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1076826 |
End bp | 1078538 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637699780 |
Product | methyl-coenzyme M reductase, alpha subunit |
Protein accession | YP_304447 |
Protein GI | 73668432 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4058] Methyl coenzyme M reductase, alpha subunit |
TIGRFAM ID | [TIGR03256] methyl-coenzyme M reductase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCAG ACATTTTCTC AAAATTTAAA AAGGATATGG AAGTCAAGTT CGCACAGGAA TTTGGTTCAA ACAAGCAGAC TGGTGGCGAC ATTACCGACA AGACTGCAAA GTTCCTGAGA CTGGGCCCTG AGCAGGACCC CAGAAAAGTC GAAATGATTA AAGCCGGTAA GGAAATTGCT GAGAAGAGAG GTATTGCATT CTACAACCCA ATGATGCACT CCGGTGCTCC TCTCGGTCAG CGTGCAATCA CTCCTTACAC CATCTCCGGC ACTGATATTG TTTGTGAACC TGATGACCTC CACTACGTGA ACAACGCTGC AATGCAGCAG ATGTGGGATG ACATCAGAAG AACTTGTATT GTCGGTCTTG ACATGGCTCA CGAGACCCTC GAGAAGAGGC TGGGTAAGGA AGTCACTCCT GAAACCATCA ACCACTACCT TGAAGTCCTT AACCACGCCA TGCCCGGTGC AGCAGTGGTT CAGGAAATGA TGGTCGAAAC CCACCCTGCC CTTGTTGACG ACTGTTACGT GAAAGTCTTC ACAGGTGACG ATGCTCTCGC AGACGAAATC GACAAGCAGT TCCTTATTGA CATCAACAAG GAATTCTCAG AAGAACAGGC AGCTCAGATT AAGGCCTCCA TCGGCAAGAC TTCCTGGCAG GCAATCCACA TCCCAACAAT TGTCTCCAGA ACAACAGACG GTGCTCAGAC CTCCAGGTGG GCAGCCATGC AGATCGGTAT GTCTTTCATC TCCGCATACG CAATGTGTGC TGGTGAAGCA GCCGTCGCTG ACCTGTCCTT CGCTGCAAAG CACGCAGCTC TTGTCTCCAT GGGTGAAATG CTTCCAGCAA GGCGTGCACG TGGACCTAAC GAGCCTGGTG GACTTTCCTT CGGTCACCTG TCAGACATAG TCCAGACAAG CCGTGTCTCT GAAGACCCAG CAAAGATTGC TCTTGAAGTC GTCGGTGCAG GCTGTATGCT CTACGACCAG ATCTGGCTCG GATCCTACAT GTCCGGTGGT GTCGGATTCA CACAGTATGC AACAGCTGCA TACACCGATG ATATCCTCGA CAACAACACC TACTACGACG TTGACTACAT CAATGACAAG TACAACGGTG CTGCAACTGT CGGTAAGGAC AACAAGGTAA AGGCAAGCCT CGAAGTCGTA AAGGACATAG CAACCGAATC CACACTCTAT GGTATCGAGA CCTACGAGAA GTTCCCGACT GCCCTTGAAG ACCACTTCGG TGGGTCCCAG AGAGCAACCG TGCTCGCAGC TGCAGCCGGT GTTGCATGCT CTCTTGCTAC AGGAAACGCC AATGCCGGTC TCTCAGGTTG GTACCTCTCC ATGTACCTGC ACAAGGAAGC ATGGGGCAGA CTCGGATTCT TCGGTTTCGA CCTGCAGGAC CAGTGCGGTG CCACAAATGT TCTGTCCTAC CAGGGCGACG AAGGTCTCCC AGACGAACTC CGTGGTCCAA ACTACCCCAA CTACGCAATG AACGTTGGTC ACCAGGGTGG ATACGCAGGT ATCGCTCAGG CAGCTCACTC CGGCCGTGGC GACGCATTTA CCGTCAACCC ACTCCTCAAG GTCTGCTTCG CTGACGACCT CCTGCCCTTC AACTTTGCAG AGCCCAGGAG AGAGTTCGGC CGCGGTGCCA TCAGAGAGTT CGTGCCTGCT GGTGAGAGAT CTCTCGTCAT TCCAGCAAAA TAA
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Protein sequence | MAADIFSKFK KDMEVKFAQE FGSNKQTGGD ITDKTAKFLR LGPEQDPRKV EMIKAGKEIA EKRGIAFYNP MMHSGAPLGQ RAITPYTISG TDIVCEPDDL HYVNNAAMQQ MWDDIRRTCI VGLDMAHETL EKRLGKEVTP ETINHYLEVL NHAMPGAAVV QEMMVETHPA LVDDCYVKVF TGDDALADEI DKQFLIDINK EFSEEQAAQI KASIGKTSWQ AIHIPTIVSR TTDGAQTSRW AAMQIGMSFI SAYAMCAGEA AVADLSFAAK HAALVSMGEM LPARRARGPN EPGGLSFGHL SDIVQTSRVS EDPAKIALEV VGAGCMLYDQ IWLGSYMSGG VGFTQYATAA YTDDILDNNT YYDVDYINDK YNGAATVGKD NKVKASLEVV KDIATESTLY GIETYEKFPT ALEDHFGGSQ RATVLAAAAG VACSLATGNA NAGLSGWYLS MYLHKEAWGR LGFFGFDLQD QCGATNVLSY QGDEGLPDEL RGPNYPNYAM NVGHQGGYAG IAQAAHSGRG DAFTVNPLLK VCFADDLLPF NFAEPRREFG RGAIREFVPA GERSLVIPAK
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