Gene Mbar_A0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0880 
Symbol 
ID3626188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1059425 
End bp1060666 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content39% 
IMG OID637699767 
ProductDNA primase large subunit 
Protein accessionYP_304434 
Protein GI73668419 
COG category[L] Replication, recombination and repair 
COG ID[COG2219] Eukaryotic-type DNA primase, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGG AACATATCGC TCTTTACCCA TTTGCTTCAG AAGTATCTGC TTATGTAGAA 
AGCCTCAGAG TCTCGTTAGA GAGTTTGCTT AATTCTCCGG CCTTTCGGAG ATCTCGAGTT
CGCGGGATGG AAAGAGTAAT GCAATCCATC GAAGGAGAGA TTGAAACAAC GCTCATAAAA
GATGAAAGCT GGCTTCTTTC CGAAACTCTA TCTTATCCTT TTGCTCAAAT TCTGGTCGCT
TGCGTAGATG ACCAGTTATT CACCAAGCGA TATGCACTTA AAGAAGCGGA AGCAGCTTCA
AAATGGCTCG AAAAAGAAAG TACTGATTTT TTGCTTGAAT TTGGGGAGGA CTTTGGGATT
CAAGCCGAAG CTGAAGAGTT ACAGTTCAGT ATGCATTTTG CAGATTATAT ACGTTTTTCT
TCTTCGATAA GAGAACCAGT CTGGAAATTA ACGAATCGGC AGCTTAGATC CGGAATGGTT
GTGGTTACGA AAAAAGACTT TGTAAGACTT CTTCAAGAAG CAATCAAAGA AAGAATAGAA
AAATCATTTC CCATCCCCAA AATCCCTTCT GAAGTATCAA GTTTCTGCGC GCCTTATGTT
GCTGAAATAA AAGATAAATT TGAGGTCCAC AAGAAAAAAT TCGGAACAAC GGACTTTGGT
GTAGTGGAAC CAGACCTCTT TCCTCCCTGT ATATCCCATG CCCTTGCAAA CGTACAGGGT
GGAGTAAATC TTGCCCATTC TATGCGCTTT GCCATGACCT CCTTCCTGCT CAGTGTGGGA
ATGTCAGTGG ATGAAATTCT TAACCTTTTC AATGTATCTC CTGATTTTGA CGCGGAAGTA
ACCCTTTATC AGATAGAACA TATCGCAGGC GCAACAGGAA ACGTATACAA GCCTCCTGCA
TGTGATACTA TGAGAACCTA TGGGAACTGC ATAGGTAAAG ACCGATTGTG TGAAAAAATC
AATCATCCTC TGGCGTATTA CGAGAAAAAA ATATATTTGA AAAATAAAGA AAAGGAAATG
GAAAAAGAGA AGGAAGAGAA AGAAGAAAAG GAAAAACAAG AAGAAAAGAA AGAGGAAGAG
GAAAAGGAAA AACAAGAAGA AATAAAGAAG AAAAAGAAAA AGGAAAAACA AGAAGAAAAA
GGGAAGAAAA TAAAAGAGGG AAAGAAAAGG GAAAGAAAAC AGGAAAAAGA AACGAAAAGA
AGAGAAGGAA AGGAAAAACA GGAAGAAAAG AAAAGAATAT AA
 
Protein sequence
MDEEHIALYP FASEVSAYVE SLRVSLESLL NSPAFRRSRV RGMERVMQSI EGEIETTLIK 
DESWLLSETL SYPFAQILVA CVDDQLFTKR YALKEAEAAS KWLEKESTDF LLEFGEDFGI
QAEAEELQFS MHFADYIRFS SSIREPVWKL TNRQLRSGMV VVTKKDFVRL LQEAIKERIE
KSFPIPKIPS EVSSFCAPYV AEIKDKFEVH KKKFGTTDFG VVEPDLFPPC ISHALANVQG
GVNLAHSMRF AMTSFLLSVG MSVDEILNLF NVSPDFDAEV TLYQIEHIAG ATGNVYKPPA
CDTMRTYGNC IGKDRLCEKI NHPLAYYEKK IYLKNKEKEM EKEKEEKEEK EKQEEKKEEE
EKEKQEEIKK KKKKEKQEEK GKKIKEGKKR ERKQEKETKR REGKEKQEEK KRI