Gene Mbar_A0821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0821 
Symbol 
ID3626843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp997706 
End bp998980 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content46% 
IMG OID637699712 
Producthypothetical protein 
Protein accessionYP_304378 
Protein GI73668363 
COG category[S] Function unknown 
COG ID[COG1944] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00702] uncharacterized domain
[TIGR03266] putative methanogenesis marker protein 1
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAA TAAAACTTGA CAGATCGATC TCATATCTCG AAGGTACACA GCGAGTATAT 
GACGAAGCCA CAACCCTGGA AAACACTAAA GATGAGGTAA AAAAGGTAGG GGTTACCCGA
CTTGCAGATA TTACAAACCT TGATAGGCTC GGAATTCCTA TTTTTTCGGC AATCCGCCCC
AGTGCCGCAA AGGGAGCGAT CAGTATATAC TCAGGCAAGG GATCAACAGA GCAGCGGGCC
CGGATTTCAG CAATAATGGA AAGCTTTGAG CGCTGCCTTG CAGAAAAGCC TGGCCTGAAC
ACAAATATTA AAGGTGAGAT TTCTGCCCCG ACTCTTGTAG AATCCTATAC CAGGGCTACA
GAAAGCTGCA AAGTGCTCGA CCCGGAAACA CTACTTTTGC CCCAGCCTTA TCTCCCCCAG
TCTTTGCTTG AATGGATTGG AGCATACGAT TTGATGAACA ATGAAGAAGT GTTCGTAAGC
TCGAACTCAG TTTACCACCC TTACGACTCT CCTGGACAAT GCCAGAAGCT CTTCCTGAGC
AATACCAACG GGCTGGCTTC CGGAAACGTG ATTGAGGAAG CTATTCTCCA CGGGCTGCTA
GAAGTTATAG AAAGGGATGC AATCAGCATA GCACAGTTTT CCCGCAACCT CGGAAAAGAA
ATCGTGCTGA CTGAGGAAGA CGGATACTTG TACGAACTTG CCAGCAAATT TAAAGATGCA
GGAATAGAAC TCAAAATCTG GCTGGTTCCA AGCGATACCG GCATTCCAAC AGTAATTGCG
GTAACTGACG ACGTAAAATT GAAAGACCCC GCGCTTCTTG TCATGGGGGC AGGCTCTCAC
CTGAAACCCG AAATTGCAGT TTCACGGGCA ATAACCGAAG CTGCACAGTC CCGATTAGTT
CAAATCCAGG GAGCAAGGGA AGATACGGAT CGGGAAGGTT TTATCCGAAG CGTGGGATAC
GAACGCATGA AACGTTTGAA CTGGTTCTGG TTCGAAGACG GAGAAAAAAT TTCTCTTTCC
GAAGTGCAGG ACCTGTCCAG AAAAAGCCCT GCAGAAAATA TCGATGTGAT CCTCGAAAAA
CTTAAGGGCC TTGCTAAGAG AGTGCTGGTG GTAGACCTAT CAAGAGAAGA AGTTAAAGTG
CCGGTTGTCC GAGTAATAAT TCCAGGCTTT GAACTTTTTA CTATTGATCG TGATCGTAAA
GGAAAAAGAA TTGGTTCCCA AAGGAAGAAA GAATTCTCCA GAAACAAAAA TGAAAAGCCG
TGGAAGAGAC GATGA
 
Protein sequence
MPEIKLDRSI SYLEGTQRVY DEATTLENTK DEVKKVGVTR LADITNLDRL GIPIFSAIRP 
SAAKGAISIY SGKGSTEQRA RISAIMESFE RCLAEKPGLN TNIKGEISAP TLVESYTRAT
ESCKVLDPET LLLPQPYLPQ SLLEWIGAYD LMNNEEVFVS SNSVYHPYDS PGQCQKLFLS
NTNGLASGNV IEEAILHGLL EVIERDAISI AQFSRNLGKE IVLTEEDGYL YELASKFKDA
GIELKIWLVP SDTGIPTVIA VTDDVKLKDP ALLVMGAGSH LKPEIAVSRA ITEAAQSRLV
QIQGAREDTD REGFIRSVGY ERMKRLNWFW FEDGEKISLS EVQDLSRKSP AENIDVILEK
LKGLAKRVLV VDLSREEVKV PVVRVIIPGF ELFTIDRDRK GKRIGSQRKK EFSRNKNEKP
WKRR