Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0821 |
Symbol | |
ID | 3626843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 997706 |
End bp | 998980 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637699712 |
Product | hypothetical protein |
Protein accession | YP_304378 |
Protein GI | 73668363 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03266] putative methanogenesis marker protein 1 [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGAAA TAAAACTTGA CAGATCGATC TCATATCTCG AAGGTACACA GCGAGTATAT GACGAAGCCA CAACCCTGGA AAACACTAAA GATGAGGTAA AAAAGGTAGG GGTTACCCGA CTTGCAGATA TTACAAACCT TGATAGGCTC GGAATTCCTA TTTTTTCGGC AATCCGCCCC AGTGCCGCAA AGGGAGCGAT CAGTATATAC TCAGGCAAGG GATCAACAGA GCAGCGGGCC CGGATTTCAG CAATAATGGA AAGCTTTGAG CGCTGCCTTG CAGAAAAGCC TGGCCTGAAC ACAAATATTA AAGGTGAGAT TTCTGCCCCG ACTCTTGTAG AATCCTATAC CAGGGCTACA GAAAGCTGCA AAGTGCTCGA CCCGGAAACA CTACTTTTGC CCCAGCCTTA TCTCCCCCAG TCTTTGCTTG AATGGATTGG AGCATACGAT TTGATGAACA ATGAAGAAGT GTTCGTAAGC TCGAACTCAG TTTACCACCC TTACGACTCT CCTGGACAAT GCCAGAAGCT CTTCCTGAGC AATACCAACG GGCTGGCTTC CGGAAACGTG ATTGAGGAAG CTATTCTCCA CGGGCTGCTA GAAGTTATAG AAAGGGATGC AATCAGCATA GCACAGTTTT CCCGCAACCT CGGAAAAGAA ATCGTGCTGA CTGAGGAAGA CGGATACTTG TACGAACTTG CCAGCAAATT TAAAGATGCA GGAATAGAAC TCAAAATCTG GCTGGTTCCA AGCGATACCG GCATTCCAAC AGTAATTGCG GTAACTGACG ACGTAAAATT GAAAGACCCC GCGCTTCTTG TCATGGGGGC AGGCTCTCAC CTGAAACCCG AAATTGCAGT TTCACGGGCA ATAACCGAAG CTGCACAGTC CCGATTAGTT CAAATCCAGG GAGCAAGGGA AGATACGGAT CGGGAAGGTT TTATCCGAAG CGTGGGATAC GAACGCATGA AACGTTTGAA CTGGTTCTGG TTCGAAGACG GAGAAAAAAT TTCTCTTTCC GAAGTGCAGG ACCTGTCCAG AAAAAGCCCT GCAGAAAATA TCGATGTGAT CCTCGAAAAA CTTAAGGGCC TTGCTAAGAG AGTGCTGGTG GTAGACCTAT CAAGAGAAGA AGTTAAAGTG CCGGTTGTCC GAGTAATAAT TCCAGGCTTT GAACTTTTTA CTATTGATCG TGATCGTAAA GGAAAAAGAA TTGGTTCCCA AAGGAAGAAA GAATTCTCCA GAAACAAAAA TGAAAAGCCG TGGAAGAGAC GATGA
|
Protein sequence | MPEIKLDRSI SYLEGTQRVY DEATTLENTK DEVKKVGVTR LADITNLDRL GIPIFSAIRP SAAKGAISIY SGKGSTEQRA RISAIMESFE RCLAEKPGLN TNIKGEISAP TLVESYTRAT ESCKVLDPET LLLPQPYLPQ SLLEWIGAYD LMNNEEVFVS SNSVYHPYDS PGQCQKLFLS NTNGLASGNV IEEAILHGLL EVIERDAISI AQFSRNLGKE IVLTEEDGYL YELASKFKDA GIELKIWLVP SDTGIPTVIA VTDDVKLKDP ALLVMGAGSH LKPEIAVSRA ITEAAQSRLV QIQGAREDTD REGFIRSVGY ERMKRLNWFW FEDGEKISLS EVQDLSRKSP AENIDVILEK LKGLAKRVLV VDLSREEVKV PVVRVIIPGF ELFTIDRDRK GKRIGSQRKK EFSRNKNEKP WKRR
|
| |