Gene Mbar_A0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0768 
Symbol 
ID3626386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp929880 
End bp930632 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content36% 
IMG OID637699659 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_304325 
Protein GI73668310 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000904176 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTATCA GTGAAACCGC AAACAGGAAC CATGAAAAAT TATTTCCCAA TAATGAATCT 
ACACTAAAAA TAACAGATCC GGAACTTATA GAAATTTTTG ACAATTTTGC TTTTGATGAA
GTGATCAGTT ATGGAAATCT GGATACAAAA ACCAGGTTAA TGGTCATTTT AGCATCATTG
ATTGCAAGTC AGACTTTAAG CGAATATAAA GTAATGCTTG GTGCTGCACT TAATGTCGGT
GTAACTCCAA TTGAGGTTAA GGAGATTGTA TATCAATCTG TACCATATGT TGGGATGGCG
AAGGCATTTG ATTTTATCCA TGCTACTAAT GAAATACTGG AAAGTAGAGG AGTAAAACTA
CCATTAGAAG GTCAATCTAC AACTTCACCG GAGACACGAT ATGAAAAAGG ACTGGAAGTA
CAAAAATCAA TTTTTGGAGA GATAATTGAT AAAATGTATG AGGAATCACC AGCAAACCAG
ATCCATATTC AGAGATATTT ATCTGCAAAT TGTTTTGGTG ATTACTACAC CAGAAAAGGA
CTGGATATAA AAACAAGAGA GCTTTTGACA TTTTCTGTGA TTTTATCCTT GGGTGGATGT
GAGCCTCAGT TAAAGGGACA TATTCAGGGA AATCTGAATG TTGGAAACGA TAAAGAAACA
TTGCTTAGTG CAGTTACGCA GCTATTGCCG TATATCGGAT ATCCAAGAAC ATTGAATGCG
ATTGCGTGTT TGAACGAAGT GATACCAGAT TAG
 
Protein sequence
MGISETANRN HEKLFPNNES TLKITDPELI EIFDNFAFDE VISYGNLDTK TRLMVILASL 
IASQTLSEYK VMLGAALNVG VTPIEVKEIV YQSVPYVGMA KAFDFIHATN EILESRGVKL
PLEGQSTTSP ETRYEKGLEV QKSIFGEIID KMYEESPANQ IHIQRYLSAN CFGDYYTRKG
LDIKTRELLT FSVILSLGGC EPQLKGHIQG NLNVGNDKET LLSAVTQLLP YIGYPRTLNA
IACLNEVIPD