| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0685 |
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| Symbol | |
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| ID | 3625638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 822760 |
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| End bp | 823593 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637699577 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_304243 |
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| Protein GI | 73668228 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | [TIGR01247] daunorubicin resistance ABC transporter membrane protein
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.537478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.14182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCG AATTTCGTGC CATATACTGG AGAGAGATGC TGAAATACTT TAGATATAAA
TCAGTACTCA TCACTTCAAT GATCCAACCT GTGATGTGGC TAGCATTTTT TGGGCTTGCC
ATGTCAGATA GTTTTGACAA ACTAACTTCA CTTGTTCCAA ATGAACCCGG CGTTCCCATC
GTCAAATATA TTACCTACAT GGGTGCAGGA ATAATTGCAA TGGATGTGCT GTTCAGCAGT
TTGTTTGGAG GCACTACCCT TATGTTTGAC AAAAAATTTA GCCTTTTAAG GGAAACCCTT
GCGAGTCCAG TCCCCAGGTC TCATATTATT CTCGGTGTTG GACTTTCCGG TGTGACCAAA
GCCCTCTTTC AAACTTTCAT AATAATTGGG TTCGGAAAAC TTGTAGGAAT GGAGTTCTTT
AAGGGATATA CACTTATTGA AACTCTTATC GCAATGGTGG GTATTATGTT ACTAGTGTCA
ATTTTTACTC TTGGCTTCCT TTTTCTGTCA GGTTCAATTG CAATTACCGT TGAAAATCCG
GAGGGAATGC AGTCTATTCT CACCCTGGTT AGCATGCCAA TTTTCTTCGT AAGTAACGCC
CTTTATCCTA TTGACGGATT TCCTACTTTC CTCAAAATTC TATCAATGTT TAACCCGCTG
ACCCTTCTGG CCGGTGGAAT TCGTTACTTT GCTTTGGGAA CCGATTTTTC TGTGATGGGA
ATTCACTATA TCTATACAAC AGTTGATATA GTCGCGTCTT TCTTGGGCCT CGTTTTCTTC
GCCCTTGCAA TGCTATCTAT TGCTATGTGG AGGTTTAATA AAGTAGACAT ATAA
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| Protein sequence | MSFEFRAIYW REMLKYFRYK SVLITSMIQP VMWLAFFGLA MSDSFDKLTS LVPNEPGVPI
VKYITYMGAG IIAMDVLFSS LFGGTTLMFD KKFSLLRETL ASPVPRSHII LGVGLSGVTK
ALFQTFIIIG FGKLVGMEFF KGYTLIETLI AMVGIMLLVS IFTLGFLFLS GSIAITVENP
EGMQSILTLV SMPIFFVSNA LYPIDGFPTF LKILSMFNPL TLLAGGIRYF ALGTDFSVMG
IHYIYTTVDI VASFLGLVFF ALAMLSIAMW RFNKVDI
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