Gene Mbar_A0681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0681 
Symbol 
ID3625634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp814521 
End bp815189 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content43% 
IMG OID637699574 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_304240 
Protein GI73668225 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.614663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGAAG TTATTGATGT CAAAAAGAGC TATACTCTTG GAGATCTGGA GATTCCAATC 
CTTCATGATA TAAACCTTAA AGTGCGGGAG GGAGAATTCC TTGCCATAAT GGGGCCCTCT
GGCTCAGGGA AGAGCACACT TATGAATCTT ATAGGTTTTC TTGATAGACC TACAGAAGGG
ACAATCATAA TTAAAGGTCT GGATATCAAT AAACTATCTG ACAAGGAAGT TGCCAGGCTC
AGAGGGTTAG AAATTGGTTT TATTTTTCAG ACATTCAATC TGATTCCCAG GCTTACAGCT
CTTGAAAATG TTGAGCTTCC CACCTATGCT AACACAAGGA GTGGAGTCAA TACTCATGAA
AGAGCAAAGG GATTACTTAA ACTCGTGGGT CTGGAGGATC GAATGCACCA CAAGCCCGGT
GAGCTTTCAG GTGGTCAATC CCAGAGAGTT GCTATTGCCA GAGCTCTTAT CAATGACCCT
GCGATCCTCC TTGCAGATGA GCCCACTGGA AATCTGGACT CGAAGACAGG CTGTGAAATT
CTAAATATAT TTAGAAGACT CAACGACGAC GGAAGAACAA TTGTAATGAT TACTCATGAT
CCGGAAATTG CAGGATATGC AGACAGGATA GTGCTCGTAA AGGATGGGAT AGTTCAGAAT
ACGGAATGA
 
Protein sequence
MIEVIDVKKS YTLGDLEIPI LHDINLKVRE GEFLAIMGPS GSGKSTLMNL IGFLDRPTEG 
TIIIKGLDIN KLSDKEVARL RGLEIGFIFQ TFNLIPRLTA LENVELPTYA NTRSGVNTHE
RAKGLLKLVG LEDRMHHKPG ELSGGQSQRV AIARALINDP AILLADEPTG NLDSKTGCEI
LNIFRRLNDD GRTIVMITHD PEIAGYADRI VLVKDGIVQN TE