Gene Mbar_A0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0678 
Symbol 
ID3625631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp810389 
End bp810943 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content43% 
IMG OID637699571 
Productflavoredoxin 
Protein accessionYP_304237 
Protein GI73668222 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.616599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTA CCCTCGTAGG GGCTTGTGTA AACGGAAAGC CGAATTACCT GACAGTCGCT 
TTTTGCGGAG TCGTACAGGC AAGCCCTCCC ATGATTGCGG TGACCCTTGG GAAAATACAC
CATACAAATG AAGGAATAAG GGAAAACCAG TGCTTTAGTG TAAATATTCC TTCCAGGTAT
ATGGTGGAGT CTACGGACTA CTGCGGTATA GTCTCCGGAA AAAGAATAGA TAAATCCGAA
ATTTTCGAAA CCTTCTATGG AAAACTTGAA AGAGCTCCGA TGATCCGGGA ATGTCCTGTG
AATCTTGAGT GCAAGCTTAT AGACATTCTG GATTTCGGAG GCGCGAGTGA AGTTTTCATA
GGGGAGATTG TTGAAAGTTA TGCAGAGGAA AGGTATCTTT GTAATGAAAT CCCTGATATA
GAGAAGATTG AGCCTATAGT TTTTTCTATG TATGATAATA ATTACTGGGG AATAGGTGAA
CACCTAGGCA AAGCCTGGTC TATCGGGAAA AATTTTGCTG AAGGCGGTAA CGAAAAAAAA
AGCTGGAAAC GCTGA
 
Protein sequence
MPTTLVGACV NGKPNYLTVA FCGVVQASPP MIAVTLGKIH HTNEGIRENQ CFSVNIPSRY 
MVESTDYCGI VSGKRIDKSE IFETFYGKLE RAPMIRECPV NLECKLIDIL DFGGASEVFI
GEIVESYAEE RYLCNEIPDI EKIEPIVFSM YDNNYWGIGE HLGKAWSIGK NFAEGGNEKK
SWKR