Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0678 |
Symbol | |
ID | 3625631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 810389 |
End bp | 810943 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637699571 |
Product | flavoredoxin |
Protein accession | YP_304237 |
Protein GI | 73668222 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.616599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACTA CCCTCGTAGG GGCTTGTGTA AACGGAAAGC CGAATTACCT GACAGTCGCT TTTTGCGGAG TCGTACAGGC AAGCCCTCCC ATGATTGCGG TGACCCTTGG GAAAATACAC CATACAAATG AAGGAATAAG GGAAAACCAG TGCTTTAGTG TAAATATTCC TTCCAGGTAT ATGGTGGAGT CTACGGACTA CTGCGGTATA GTCTCCGGAA AAAGAATAGA TAAATCCGAA ATTTTCGAAA CCTTCTATGG AAAACTTGAA AGAGCTCCGA TGATCCGGGA ATGTCCTGTG AATCTTGAGT GCAAGCTTAT AGACATTCTG GATTTCGGAG GCGCGAGTGA AGTTTTCATA GGGGAGATTG TTGAAAGTTA TGCAGAGGAA AGGTATCTTT GTAATGAAAT CCCTGATATA GAGAAGATTG AGCCTATAGT TTTTTCTATG TATGATAATA ATTACTGGGG AATAGGTGAA CACCTAGGCA AAGCCTGGTC TATCGGGAAA AATTTTGCTG AAGGCGGTAA CGAAAAAAAA AGCTGGAAAC GCTGA
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Protein sequence | MPTTLVGACV NGKPNYLTVA FCGVVQASPP MIAVTLGKIH HTNEGIRENQ CFSVNIPSRY MVESTDYCGI VSGKRIDKSE IFETFYGKLE RAPMIRECPV NLECKLIDIL DFGGASEVFI GEIVESYAEE RYLCNEIPDI EKIEPIVFSM YDNNYWGIGE HLGKAWSIGK NFAEGGNEKK SWKR
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