Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0662 |
Symbol | |
ID | 3627798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 786180 |
End bp | 787214 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637699554 |
Product | coenzyme F420 hydrogenase beta subunit |
Protein accession | YP_304221 |
Protein GI | 73668206 |
COG category | [C] Energy production and conversion |
COG ID | [COG1035] Coenzyme F420-reducing hydrogenase, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.368347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAC AGAAACCAAT TAGCAAAAGT TACCTTGACC TTAAGTCGAA AGTCTGGGAC GAAGGTCTTT GCTCAGGCTG CGGGGCCTGC ATTGCAGTCT GCCCTGCTGA TGCTCTATAC TTCGAAACAG GCGGCGATTC CACACATCCG AAGAGCAATA ATTACTGCAA AGCTGCGGTT GACGATGTTC CATGCGGAGC CTGTTACGAG GTTTGTCCGA GACTCGAAGA ACAGCCTTCA AGCCTTCTCG GAGATTACCT TGAAATTACT GCTGGAAAAG CCGAGTTTGA TATTCCGAAA AAGCAGAGTG GAGGAGCAGT AACAGCAATT CTTGCAAACG CCCTGGATAC AGGCCTTGTA GATGCTGTAG TTACGGTTAC GGAAGATCCC TGGACCCTCA AGCCTCACTC AATGGTAATA ACCAAAAGTG AAGCTCTTGT CGGTCAGGCA GGAAGCCGTT ACAACTGGTG GGTTCCTCTT GTTTATTCCC TTAAGGAAGC GGTTGTAAAC AGGAAGTACA GGAACATTGC AGTCGTTGGA GTCCCCTGCG TAGTTCAAGC AGTTCGCAAA ATGCTTGAAA CCGACAACCA ACTTGTGGGC CCATACAAAA AATCCATTCG CTTTGTCATG GGGCTTTTCT GCACGGAAAG TTTCGACTAC GAAAAACTTA TTGCAGGCAA GCTGAAAAGC GAGTACGCTC TCGAACCCAT GAAGGTTTGC CGCATTGACG TTAAGGGCAA GCTCGAAATC ACCCTCGATG ACGGTACACA GTATGTAATT CCCCTTACCG AACTTGAGGA TACTACTCGC CCAGGCTGCA GTGTCTGTAC GGACTTTACC GCTCTCAAGG CTGATATTTC AGCCGGCTCA GTTGGAAGCC CTGACGGCTA CACCACTCTT GTTGTCCGTA CTATTGTAGG ACAGCACATT CTTGAAAGCG CAGTTGCTAA CAAGAAATTG AGCGTTGGCG GTGAAGTAAA CTTAGGGATC ATTGAAAAGC TTGCAAAAAA GAAGCTTGCA AGAAAACCGG AATGA
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Protein sequence | MAEQKPISKS YLDLKSKVWD EGLCSGCGAC IAVCPADALY FETGGDSTHP KSNNYCKAAV DDVPCGACYE VCPRLEEQPS SLLGDYLEIT AGKAEFDIPK KQSGGAVTAI LANALDTGLV DAVVTVTEDP WTLKPHSMVI TKSEALVGQA GSRYNWWVPL VYSLKEAVVN RKYRNIAVVG VPCVVQAVRK MLETDNQLVG PYKKSIRFVM GLFCTESFDY EKLIAGKLKS EYALEPMKVC RIDVKGKLEI TLDDGTQYVI PLTELEDTTR PGCSVCTDFT ALKADISAGS VGSPDGYTTL VVRTIVGQHI LESAVANKKL SVGGEVNLGI IEKLAKKKLA RKPE
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