Gene Mbar_A0662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0662 
Symbol 
ID3627798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp786180 
End bp787214 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content48% 
IMG OID637699554 
Productcoenzyme F420 hydrogenase beta subunit 
Protein accessionYP_304221 
Protein GI73668206 
COG category[C] Energy production and conversion 
COG ID[COG1035] Coenzyme F420-reducing hydrogenase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.368347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC AGAAACCAAT TAGCAAAAGT TACCTTGACC TTAAGTCGAA AGTCTGGGAC 
GAAGGTCTTT GCTCAGGCTG CGGGGCCTGC ATTGCAGTCT GCCCTGCTGA TGCTCTATAC
TTCGAAACAG GCGGCGATTC CACACATCCG AAGAGCAATA ATTACTGCAA AGCTGCGGTT
GACGATGTTC CATGCGGAGC CTGTTACGAG GTTTGTCCGA GACTCGAAGA ACAGCCTTCA
AGCCTTCTCG GAGATTACCT TGAAATTACT GCTGGAAAAG CCGAGTTTGA TATTCCGAAA
AAGCAGAGTG GAGGAGCAGT AACAGCAATT CTTGCAAACG CCCTGGATAC AGGCCTTGTA
GATGCTGTAG TTACGGTTAC GGAAGATCCC TGGACCCTCA AGCCTCACTC AATGGTAATA
ACCAAAAGTG AAGCTCTTGT CGGTCAGGCA GGAAGCCGTT ACAACTGGTG GGTTCCTCTT
GTTTATTCCC TTAAGGAAGC GGTTGTAAAC AGGAAGTACA GGAACATTGC AGTCGTTGGA
GTCCCCTGCG TAGTTCAAGC AGTTCGCAAA ATGCTTGAAA CCGACAACCA ACTTGTGGGC
CCATACAAAA AATCCATTCG CTTTGTCATG GGGCTTTTCT GCACGGAAAG TTTCGACTAC
GAAAAACTTA TTGCAGGCAA GCTGAAAAGC GAGTACGCTC TCGAACCCAT GAAGGTTTGC
CGCATTGACG TTAAGGGCAA GCTCGAAATC ACCCTCGATG ACGGTACACA GTATGTAATT
CCCCTTACCG AACTTGAGGA TACTACTCGC CCAGGCTGCA GTGTCTGTAC GGACTTTACC
GCTCTCAAGG CTGATATTTC AGCCGGCTCA GTTGGAAGCC CTGACGGCTA CACCACTCTT
GTTGTCCGTA CTATTGTAGG ACAGCACATT CTTGAAAGCG CAGTTGCTAA CAAGAAATTG
AGCGTTGGCG GTGAAGTAAA CTTAGGGATC ATTGAAAAGC TTGCAAAAAA GAAGCTTGCA
AGAAAACCGG AATGA
 
Protein sequence
MAEQKPISKS YLDLKSKVWD EGLCSGCGAC IAVCPADALY FETGGDSTHP KSNNYCKAAV 
DDVPCGACYE VCPRLEEQPS SLLGDYLEIT AGKAEFDIPK KQSGGAVTAI LANALDTGLV
DAVVTVTEDP WTLKPHSMVI TKSEALVGQA GSRYNWWVPL VYSLKEAVVN RKYRNIAVVG
VPCVVQAVRK MLETDNQLVG PYKKSIRFVM GLFCTESFDY EKLIAGKLKS EYALEPMKVC
RIDVKGKLEI TLDDGTQYVI PLTELEDTTR PGCSVCTDFT ALKADISAGS VGSPDGYTTL
VVRTIVGQHI LESAVANKKL SVGGEVNLGI IEKLAKKKLA RKPE