Gene Mbar_A0660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0660 
Symbol 
ID3627796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp782959 
End bp784665 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content37% 
IMG OID637699552 
Producthypothetical protein 
Protein accessionYP_304219 
Protein GI73668204 
COG category[R] General function prediction only 
COG ID[COG2234] Predicted aminopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.61826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATA TTAAAAATAT TACACATTAC ATATTTTCAC ATACATATCT TATAATTTTT 
TTAATATTAT TAGTACCTTC CTCAACAGCT ATTGCACTCT CTAATAACAT ATCTTCCGAT
TTCAATATTC ATTATAATAA CACGTCAGTT ACGCTTGATG TTTCAGAGAC AGGGCTTGAA
AACTCAACCC GAACAATATC TTCCTTTGGG GAAAGAAAAA TAGGAAGTCA GAACGCTGCA
GAAGCCTCTC TATTTATAAA AGAGGAGATG GAAAAGGCAG GCCTGCAGGT TTCTCTGGAC
AATTTTTCCG CGCGGGTACG TACACGGGAC TTCAATTACT GGAATGTAAG CGGCACAAAC
GTAGTGGGGA TTAAAGAGGG AAACGACCTT AAAGACGAGA TAATTCTTGT AACCGCTCAT
TATGATTCAA GAATAATTGT ACGTCCAGAA TCAGGTTTAC GAGATATTTT TGATTCTGAG
ATAAGAAAGC CCTATCTCTG GCCAGTCTGG TCCGATACTT ACGTTTGCGA ATCGGCCAAC
GGAACCGGAG CGGATGACAA TGCCGGAGGG GTGGCTTGTA TGCTTGAACT TGCAAGGGTC
TTGCAGAATG AGTCTTTTGA CAGGACAATA TATTTCATTG CTTTTTCCGG AGAAGAATAC
AATCTTCTTG GCAGCCAGGC CTGGGTTGAA GCCCATTCTG AGTTGGAAAA TGATATTGTT
GCAGTTATTA ATGTGGATTC TATAGGAAAC GAGCCTCTCT ACATAGAATA TCTTCCCCAG
AATGCCTGGC TTAAATCCGT TCTTGAAAAC GAGACAAGAG ACCTAGGGAT CGAAATTCAA
TGTGAAATTC CGGATTATTC AAGCTTTATT CATCCTTTAA TCGGAGGAGA TCATGAAATA
TTCTGGGAAA GTGATATCCC TGCAGTTGCA ATTTGCCATC ACAACGATAG AAACTTCCAC
AAGTTAAGTG ATACAATTGA CAATGTTGAT TTTTCGGTTG TCAGGAATGC AAGTGTTCTG
ACTGCCAAAA GTCTCATCTA TCTGGCTAGT CCTGACGAAA ATCAGGGTCC TTTTGTCAAT
ATTTCCAATT CACACGTTTC TGGAGACTCT CTTAAACTTA TCTATAAAGT ATCTGACCCA
GAGGCTACTA TTAATATCTT TTTTGACAAT CAGAACCTGG GAAATCTCCA ATCAGGCAGG
AATTTTTCAC TTCCGGAAGG AGAACATACT ATCAAAGTTT TTGCAACCGA CTGTTATGGA
AACAGAGGCT CTGATAGTAT AAATATTGTA AATGAGAAAA ACCAAAATAG AAGTTTTGAG
CCTCCAAGTC AGGATAAAAA ATACTGCGGT AATTATATAA TTGGGTACCC AAAAAATTTT
GTGGACTCAA ATAGAACTCT TTATTTTTAT CTGGATAATT TTGGGCCTCT GTATCCAGGG
AATCTTTTGA TTCTTACTCC AGGAAGTCAT AACCTAAAAA TATGGTCAGA AAATGAAAAC
GGAACTGTGT TTATGGAGAA TGAAATTTCT GATTTTAGAA AATACTCTAT GGAAATGATT
GAGATAAATA ATCCGATTGC TGATCGTAAA AATCCTCTTC TTTTCCTTTC ATGTTTATTT
GCAATTTTGG CTATTGTTGC GTTTTATGGG AAGCGGATAA AAAGAAAATT ATTGAATCTA
AAAGGTTCTA AAGATAAATA TAAATAA
 
Protein sequence
MIDIKNITHY IFSHTYLIIF LILLVPSSTA IALSNNISSD FNIHYNNTSV TLDVSETGLE 
NSTRTISSFG ERKIGSQNAA EASLFIKEEM EKAGLQVSLD NFSARVRTRD FNYWNVSGTN
VVGIKEGNDL KDEIILVTAH YDSRIIVRPE SGLRDIFDSE IRKPYLWPVW SDTYVCESAN
GTGADDNAGG VACMLELARV LQNESFDRTI YFIAFSGEEY NLLGSQAWVE AHSELENDIV
AVINVDSIGN EPLYIEYLPQ NAWLKSVLEN ETRDLGIEIQ CEIPDYSSFI HPLIGGDHEI
FWESDIPAVA ICHHNDRNFH KLSDTIDNVD FSVVRNASVL TAKSLIYLAS PDENQGPFVN
ISNSHVSGDS LKLIYKVSDP EATINIFFDN QNLGNLQSGR NFSLPEGEHT IKVFATDCYG
NRGSDSINIV NEKNQNRSFE PPSQDKKYCG NYIIGYPKNF VDSNRTLYFY LDNFGPLYPG
NLLILTPGSH NLKIWSENEN GTVFMENEIS DFRKYSMEMI EINNPIADRK NPLLFLSCLF
AILAIVAFYG KRIKRKLLNL KGSKDKYK