Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0660 |
Symbol | |
ID | 3627796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 782959 |
End bp | 784665 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637699552 |
Product | hypothetical protein |
Protein accession | YP_304219 |
Protein GI | 73668204 |
COG category | [R] General function prediction only |
COG ID | [COG2234] Predicted aminopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.61826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATA TTAAAAATAT TACACATTAC ATATTTTCAC ATACATATCT TATAATTTTT TTAATATTAT TAGTACCTTC CTCAACAGCT ATTGCACTCT CTAATAACAT ATCTTCCGAT TTCAATATTC ATTATAATAA CACGTCAGTT ACGCTTGATG TTTCAGAGAC AGGGCTTGAA AACTCAACCC GAACAATATC TTCCTTTGGG GAAAGAAAAA TAGGAAGTCA GAACGCTGCA GAAGCCTCTC TATTTATAAA AGAGGAGATG GAAAAGGCAG GCCTGCAGGT TTCTCTGGAC AATTTTTCCG CGCGGGTACG TACACGGGAC TTCAATTACT GGAATGTAAG CGGCACAAAC GTAGTGGGGA TTAAAGAGGG AAACGACCTT AAAGACGAGA TAATTCTTGT AACCGCTCAT TATGATTCAA GAATAATTGT ACGTCCAGAA TCAGGTTTAC GAGATATTTT TGATTCTGAG ATAAGAAAGC CCTATCTCTG GCCAGTCTGG TCCGATACTT ACGTTTGCGA ATCGGCCAAC GGAACCGGAG CGGATGACAA TGCCGGAGGG GTGGCTTGTA TGCTTGAACT TGCAAGGGTC TTGCAGAATG AGTCTTTTGA CAGGACAATA TATTTCATTG CTTTTTCCGG AGAAGAATAC AATCTTCTTG GCAGCCAGGC CTGGGTTGAA GCCCATTCTG AGTTGGAAAA TGATATTGTT GCAGTTATTA ATGTGGATTC TATAGGAAAC GAGCCTCTCT ACATAGAATA TCTTCCCCAG AATGCCTGGC TTAAATCCGT TCTTGAAAAC GAGACAAGAG ACCTAGGGAT CGAAATTCAA TGTGAAATTC CGGATTATTC AAGCTTTATT CATCCTTTAA TCGGAGGAGA TCATGAAATA TTCTGGGAAA GTGATATCCC TGCAGTTGCA ATTTGCCATC ACAACGATAG AAACTTCCAC AAGTTAAGTG ATACAATTGA CAATGTTGAT TTTTCGGTTG TCAGGAATGC AAGTGTTCTG ACTGCCAAAA GTCTCATCTA TCTGGCTAGT CCTGACGAAA ATCAGGGTCC TTTTGTCAAT ATTTCCAATT CACACGTTTC TGGAGACTCT CTTAAACTTA TCTATAAAGT ATCTGACCCA GAGGCTACTA TTAATATCTT TTTTGACAAT CAGAACCTGG GAAATCTCCA ATCAGGCAGG AATTTTTCAC TTCCGGAAGG AGAACATACT ATCAAAGTTT TTGCAACCGA CTGTTATGGA AACAGAGGCT CTGATAGTAT AAATATTGTA AATGAGAAAA ACCAAAATAG AAGTTTTGAG CCTCCAAGTC AGGATAAAAA ATACTGCGGT AATTATATAA TTGGGTACCC AAAAAATTTT GTGGACTCAA ATAGAACTCT TTATTTTTAT CTGGATAATT TTGGGCCTCT GTATCCAGGG AATCTTTTGA TTCTTACTCC AGGAAGTCAT AACCTAAAAA TATGGTCAGA AAATGAAAAC GGAACTGTGT TTATGGAGAA TGAAATTTCT GATTTTAGAA AATACTCTAT GGAAATGATT GAGATAAATA ATCCGATTGC TGATCGTAAA AATCCTCTTC TTTTCCTTTC ATGTTTATTT GCAATTTTGG CTATTGTTGC GTTTTATGGG AAGCGGATAA AAAGAAAATT ATTGAATCTA AAAGGTTCTA AAGATAAATA TAAATAA
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Protein sequence | MIDIKNITHY IFSHTYLIIF LILLVPSSTA IALSNNISSD FNIHYNNTSV TLDVSETGLE NSTRTISSFG ERKIGSQNAA EASLFIKEEM EKAGLQVSLD NFSARVRTRD FNYWNVSGTN VVGIKEGNDL KDEIILVTAH YDSRIIVRPE SGLRDIFDSE IRKPYLWPVW SDTYVCESAN GTGADDNAGG VACMLELARV LQNESFDRTI YFIAFSGEEY NLLGSQAWVE AHSELENDIV AVINVDSIGN EPLYIEYLPQ NAWLKSVLEN ETRDLGIEIQ CEIPDYSSFI HPLIGGDHEI FWESDIPAVA ICHHNDRNFH KLSDTIDNVD FSVVRNASVL TAKSLIYLAS PDENQGPFVN ISNSHVSGDS LKLIYKVSDP EATINIFFDN QNLGNLQSGR NFSLPEGEHT IKVFATDCYG NRGSDSINIV NEKNQNRSFE PPSQDKKYCG NYIIGYPKNF VDSNRTLYFY LDNFGPLYPG NLLILTPGSH NLKIWSENEN GTVFMENEIS DFRKYSMEMI EINNPIADRK NPLLFLSCLF AILAIVAFYG KRIKRKLLNL KGSKDKYK
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