Gene Mbar_A0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0607 
Symbol 
ID3627667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp729498 
End bp731333 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content40% 
IMG OID637699500 
Producthypothetical protein 
Protein accessionYP_304167 
Protein GI73668152 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTATATTT GGAAAGATAT TAGAGATATC ATCGGAAATC CTTTTGATTT CAGCAAATTT 
GTATCCAGTC CAAATTACAC TGAGCATATC TCTTTCATAG AGCACTTCCA TTCTGATTTT
GATAGGATAC TTAAATCCTA TGTTGGAAAT TCAAGGGTTT ATGTATTTGT AGATGACCTT
GACCGTTGTG AAGTTCCAAA AGCTGCGGAA CTTATGCAAG CTCTAAACCT CATGCTCTCG
GATAAAGCAA ATGTTTATTT TTCCATAGGT ATAGACCGCA AAGTCATCTC TGCGGGACTT
GCAGCTAAAA ACGGAAAAAT CCTTAGGCAT TTGGAGGTCA ATGGACTTGA ATACGGTTAT
GATTACATTG AAAAATTTAT CCAGCTCCCT TTTAAAGTTC CCAGTCCAAA AACTGAGGAT
TTCAAGAAAT TTATGAGCCC TCAACCTGAA AAGAAAAATT CCTGGTTATA TAATAATTCA
TTGAGTAAAA AGTTTAAGAA ATTTTTCAGT ATATTTAAGG TTAATCACCT AAGTTCACAG
CATGATAAAG ACAGCACTCA GCCGGAAAGT TCTGAAAGTG GCAAACATAG AGAAGATGTT
CTCAGAAATG CTGCAAATGA TGAACCGGAA ATAGAGGGGA AGATCACGAA TGATATGGAC
TGTGATGAGA AATTAGTGGA GCTGGATCAC ATTCTAGAAA TGATTGCTCC AGCTCTTGAT
AGAAACCCCC GCCGTATGAA ACAGTTCATT AATCAGTTTC GTTTCCAGAG AACTATAGGA
AAAAGAATAG GTCTCTTTTC CTATGATAAG GGCAGTGCTC CTGAAAATAT GTGGAACTGC
AAAAAACTTG CAAAATTCGT GGCAATAAGC ATAAAGTGGA ACTCAATCAT TTCTGCTCTG
AATTCAAACA GAGCGCTTCT TACCCGCTTG CAGGAATATG CATTGAAGCC GGAAAATGAA
GATAAAAATC TGGAGAAATG GGTTCGGGAC AAAAGGCTGA TCGAATTGTT GAGGTACGGC
TGCATAGAAG AAGGTAATCT CTCGCAAAAT GCAGCCGAAT ACACGTTATC AGGCCTTGAT
CTCAGCAAGT TATTGCAGGT TTCACCCGTC ATTGTATATC CAGAACAAAG TACATCCGGG
TTTTCATCGA TTGGTATAGA TGAAATGGAG TTTGTTCGAA TCCCAGCAGG AGAATTTATG
ATGGGCTCGC CTTCCTACGA GAAAGGCGGA TATAATGATG AAGCTCCGAT CCATAAAGTA
ACAATCAAAG ATCCTTTCGA TCTTGGTAAA TATCCTGTTA CTCAAAAACA GTGGATTGAT
GTAATGGGCT ACAACCCTTC CTATTTCAAA GGTGATGATC TGCCTGTAGA ATCTGTTTCT
TGGGAGGATA TTCAGGAATT TATCAAAAAA CTCAATGATC GAGAAGACAC GGACAAATAC
ATCTTACCCT CTGAAGCCGA GTGGGAATAT GCGTGCCGTG CAGGTACTAC CACAAGATAT
TCCTTTGGTG CTGAAGAGTC AAAACTTAAT GAATATGCGT GGTACAACAA AAATTCAGGT
TTCAAAACTC ATCCAGTCGG TCAGAAGAAT CCAAATCACT GGAACATTTA CGACATGCAC
GGTAATGTTT GGGAATTGGT CCAAGACAAA TGGCATGATA ATTATGAAGA TTCTCCTTCC
GATGGTAGTG CTTGGAAAGA TGAAAGTGTG TCTTCCCATG TTCTTCGGGG TGGCGGATAT
AAAAGCGATG CTGGGGACTG CAGGTCAGCG GCACGCGGCA GGTATGTCTC CCTCCATGAC
AGCAGCTTTG GTTTCCGTCT TCTGAGGAAA TTGTAA
 
Protein sequence
MYIWKDIRDI IGNPFDFSKF VSSPNYTEHI SFIEHFHSDF DRILKSYVGN SRVYVFVDDL 
DRCEVPKAAE LMQALNLMLS DKANVYFSIG IDRKVISAGL AAKNGKILRH LEVNGLEYGY
DYIEKFIQLP FKVPSPKTED FKKFMSPQPE KKNSWLYNNS LSKKFKKFFS IFKVNHLSSQ
HDKDSTQPES SESGKHREDV LRNAANDEPE IEGKITNDMD CDEKLVELDH ILEMIAPALD
RNPRRMKQFI NQFRFQRTIG KRIGLFSYDK GSAPENMWNC KKLAKFVAIS IKWNSIISAL
NSNRALLTRL QEYALKPENE DKNLEKWVRD KRLIELLRYG CIEEGNLSQN AAEYTLSGLD
LSKLLQVSPV IVYPEQSTSG FSSIGIDEME FVRIPAGEFM MGSPSYEKGG YNDEAPIHKV
TIKDPFDLGK YPVTQKQWID VMGYNPSYFK GDDLPVESVS WEDIQEFIKK LNDREDTDKY
ILPSEAEWEY ACRAGTTTRY SFGAEESKLN EYAWYNKNSG FKTHPVGQKN PNHWNIYDMH
GNVWELVQDK WHDNYEDSPS DGSAWKDESV SSHVLRGGGY KSDAGDCRSA ARGRYVSLHD
SSFGFRLLRK L