| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0513 |
|---|
| Symbol | |
|---|
| ID | 3624253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 616982 |
|---|
| End bp | 618079 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637699406 |
|---|
| Product | ABC transporter, solute-binding protein |
|---|
| Protein accession | YP_304075 |
|---|
| Protein GI | 73668060 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGGAA AAATAAGTAC AATACTACTA CTCTCTATTC TGGTTCTGGC TGTTGCATCC
TGTGGATGTG CAGAAAATGC GAATCAGCAG GCTGTTCAGA ACTCAAGCAC TATACAGATC
ACCGACATGT TGGGCAGGCA GTTAACTGTG CCGGCGGAAA TCTCTTCAAT TGTAGCCACT
TCTCCGCCGT CCACTATCCT CGTTTATATG CTTGCTCCGG ACAAACTTTC AGGGTGGAAT
TTTAAAAATA ATTTTACTCA ACTTTACATG GTTGAAAATT ACTCAAGTCT GCCTGTAATC
GGGGGCTGGT TCGGAACACA GACCGGGAAC TATGAAACTA TAATCAAAAT GCATCCTGAC
ATTGTAATTG AAGGGTACAC CACTGATGGA GAAATACATG AGACTATAGA GCGCAGACAG
GAAAGCTTTG GAAATATTCC TGTAGTGGCT GTTGATGGTT CTATTATCTT CGTCAACAAA
TCTGACCCGA CTATACAATA TGTGGGTAAA CTTCTTAACT GTGAAGACCA GGCACAAAAA
CTGATTGATT TCCGCAGTTC AGTCCTTAGT GAGATTAATA ACACTATAAA AGATATTCCC
GAAGACCAGA AAGTACGTGT TTATTATGCC GAAGGTCCAA AAGGGCTCAT GACCGACCCT
TCAGGTTCTC AGCACTCCCA GGTCATTGAT ATCTGTGGTG GTATTAACGT TGCAGATTGT
CAGCTTACGC CAGGAAGCGG CATGACTCAG GTCTCAATCG AGCAGGTTAT GAACTGGAAC
CCTGAGATAA TTATCACCTC AAATCCACAG TTCTATTCGA CAGTTTACTC TGATTCTCTC
TGGGCAAGTA TAGATGCTGT GAAAAATAAG AAAGTATACC TTGCTCCTCA GAATCCTTTC
TGCTGGATTG ACAGGCCACA GGGCCCTCAC CTTATCCTCG GAACTGTCTG GACTGCAAAA
ATGCTGTACC CGGACCGTTT TGTAAATATG GATCTCTCCA ATCTGACTCG TGAGTTCTAC
TCGGAATTCT TCCACTATAA TCTCACGGAC AAAGAGCTGA ATGCGCTACT TAACCCTTCA
GCAGAGGCTA AGACGTGA
|
|---|
| Protein sequence | MRGKISTILL LSILVLAVAS CGCAENANQQ AVQNSSTIQI TDMLGRQLTV PAEISSIVAT
SPPSTILVYM LAPDKLSGWN FKNNFTQLYM VENYSSLPVI GGWFGTQTGN YETIIKMHPD
IVIEGYTTDG EIHETIERRQ ESFGNIPVVA VDGSIIFVNK SDPTIQYVGK LLNCEDQAQK
LIDFRSSVLS EINNTIKDIP EDQKVRVYYA EGPKGLMTDP SGSQHSQVID ICGGINVADC
QLTPGSGMTQ VSIEQVMNWN PEIIITSNPQ FYSTVYSDSL WASIDAVKNK KVYLAPQNPF
CWIDRPQGPH LILGTVWTAK MLYPDRFVNM DLSNLTREFY SEFFHYNLTD KELNALLNPS
AEAKT
|
|---|
| |