Gene Mbar_A0510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0510 
Symbol 
ID3624250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp613574 
End bp614593 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content44% 
IMG OID637699403 
Productiron compounds ABC transporter, permease protein 
Protein accessionYP_304072 
Protein GI73668057 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATT ACAAGTTTAA TCGCACTACT CTGGTGTACC TGTTACCTAT CGCATTACTC 
ATAATCTCCC TTTTTATTGG AAGATACCAG ACTCCACTGT CGGCAGTTGT GGATGAGAGT
ATTATTACTT TTTCATCCCT TTTTTTTGGC ACTCCTGCTT CGGTTTCCGC TCAACACACA
GTACTGTTCA ATGTAAGGTT ACCGAGGATA CTTGCAGCTT TACTGGTAGG TGCAGCTCTT
TCCATGGCTG GAGCCTCTTT CCAGGGAATC TTTCGTAATC CACTTGTGTC TCCTTATATC
CTTGGAGTGG GGTCCGGGGC TGGTTTTGGG GCATGCCTTG CAATATTGCT CTGGAATAAT
TATCTGATGA TACAATTGAT GGCTTTTGCT TTCGGACTCC TTGCGATGTT TTTTGCTATA
AGTATGGGTA AAGTCAGCAA AGGTACTGGA ACTTTAGTAT TCGTGCTTTC GGGAATTATT
GTGAGCTCTA TTTTCACGGC TCTTACGTCA CTGGCAAAGT ATGTAGCAGA TCCCTATGAT
CAACTTCCTG AAATAGTATT CTGGCTTATG GGAAGTCTTG CAAGTGTCAG GTACGGCGAT
TTGTTCTACA TATTATTGCC TATACTTATT GGGGCTTTCG TATTGTTTCT TTTCAGGTGG
CGTATCAACA TTTTGTCCCT GGGAGACGAG GAAGCTAAAG CTCTTGGGAC GGATGTGGAA
AAAACGCGCC TGGTTATCAT TGTTTGTGCG ACCCTTATAA CCTCAGCAGC AGTCAGTATC
AGCGGTGTCA TTGGTTGGGT CGGACTTGTT GTGCCCCATA TCTCAAGAAT GATTGTTGGT
CCCAATTATA GCCGCCTCTT GCCTATGAGT ATGGTTATTG GAGCATCGTT TATGCTGGTT
GTGGATGATC TTTCAAGGAC TATTGTAGCT ACCGAAATTC CCCTGGGAAT CCTAACTTCT
CTGGTAGGAG CTCCGTTGTT TGCATATCTT ATAAAGAAGG GGCGTATGGG ATGGAACTGA
 
Protein sequence
MPDYKFNRTT LVYLLPIALL IISLFIGRYQ TPLSAVVDES IITFSSLFFG TPASVSAQHT 
VLFNVRLPRI LAALLVGAAL SMAGASFQGI FRNPLVSPYI LGVGSGAGFG ACLAILLWNN
YLMIQLMAFA FGLLAMFFAI SMGKVSKGTG TLVFVLSGII VSSIFTALTS LAKYVADPYD
QLPEIVFWLM GSLASVRYGD LFYILLPILI GAFVLFLFRW RINILSLGDE EAKALGTDVE
KTRLVIIVCA TLITSAAVSI SGVIGWVGLV VPHISRMIVG PNYSRLLPMS MVIGASFMLV
VDDLSRTIVA TEIPLGILTS LVGAPLFAYL IKKGRMGWN