Gene Mbar_A0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0467 
Symbol 
ID3624209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp561555 
End bp562709 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content45% 
IMG OID637699360 
ProductFe(III) dicitrate ABC transporter, permease 
Protein accessionYP_304029 
Protein GI73668014 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATA AGTTAACAAC ATTCCCTATA CTTGCGATTA CATTGGTCGT TTTTTTGATT 
TTTTCAGTTT CGGGCTGTAT CACGAACGGC AGCACAGATG ACCAGGCAAA GACGATTAAC
GTTACGGACA TGGCGGGAAG ATCGGTGACA TTAAAATATC CTGTTGAGAG CCTTGTACTG
ATGGACTCAA CATGTACGGC AGAATTTTCA TCGGTCTATG GAGAGGGCTT TGATAGTAAA
ATCGTTGGAT GGGATAACAA TCTCAGGGAT AATTCCGGCG ACATGTATGA GAAATACGTG
GAAAAATTCC CTGCAATGGC CGAAATACCT GATGTAGGCT CCCTGGATGA TAATACTTTT
AATGCCGAAA AAGTGATAGC ATTGAATCCT GACGTTGTCA TCATGCACGA CTGGGAGTTC
ATGTGGGATG GGGAAGCGAC AAAGGAGGCA CTGACCAGGC TGGACCAGGC CGGTATCCCT
GTAGTATTTT TAGACTTCTA CATGGACCCC ATGACAAATT CGACAAAGAG TATGCAGTTA
CTTGGAAAGA TCACGGACAA GGAACAGAGA GCTCAGGACA TAGTTGATTA TTATGATGAT
AAAGTCAACA GCATATATTC CCGCCTGGAA AAAATACAGG GAAAGAAACC CACTGTTTAC
ATCGAATGCG CATATAAAGG CCCGGAGACT TACGGTATAT CTTATGGAGA TGTGGCATGG
GGAGACATCG TTAAGAAAGC GGGAGGAGAC AACATCGCAG AACCAATTTT ACTCAACAAA
AGCAAGGCCC TTAGCGCAGA GTATCTAGTC AACCAGAGTC CAGACATCAT TATATTGACG
GGAAGGAACT GGTCTACGCC CGGGTCACTC AGAATGGGCT ATACTTCTAC ACCTAACGTA
ACGAAGAGTA CGATGACGCC ATTCATCAAC CGTCCCGGGT GGGATACGAT AAATGCAGTA
GAGAATCAGA AGGTATACGG CATATATCAC GGCTATTGCA CGGACATATT TAACTTCGTT
GCACTGGAAG CATTCGCCAA ATGGTTCTAC CCTGAAGAGT TCAGGGACGT GGATCCTGCT
GAGACGCTCA AGGAATATCA CAGGAAGTTC ATGCCCATAG ATTATAGCGG TACACTGGTG
TACAGCTATT ATTAA
 
Protein sequence
MRNKLTTFPI LAITLVVFLI FSVSGCITNG STDDQAKTIN VTDMAGRSVT LKYPVESLVL 
MDSTCTAEFS SVYGEGFDSK IVGWDNNLRD NSGDMYEKYV EKFPAMAEIP DVGSLDDNTF
NAEKVIALNP DVVIMHDWEF MWDGEATKEA LTRLDQAGIP VVFLDFYMDP MTNSTKSMQL
LGKITDKEQR AQDIVDYYDD KVNSIYSRLE KIQGKKPTVY IECAYKGPET YGISYGDVAW
GDIVKKAGGD NIAEPILLNK SKALSAEYLV NQSPDIIILT GRNWSTPGSL RMGYTSTPNV
TKSTMTPFIN RPGWDTINAV ENQKVYGIYH GYCTDIFNFV ALEAFAKWFY PEEFRDVDPA
ETLKEYHRKF MPIDYSGTLV YSYY