| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0452 |
|---|
| Symbol | |
|---|
| ID | 3624328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 550186 |
|---|
| End bp | 551556 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637699345 |
|---|
| Product | coenzyme F420-reducing hydrogenase, alpha subunit |
|---|
| Protein accession | YP_304014 |
|---|
| Protein GI | 73667999 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR03295] coenzyme F420 hydrogenase, subunit alpha |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACGAAAG TTGTAGAAAT CTCTCCAACC ACAAGACTTG AAGGTCACTC CAAGCTCACC
CTGAAGGTAG ATGATCAGGG TATTGTTGAG CGAGGAGACT GGCTTTCTAT CACCCCGGTC
AGGGGTATTG AAAAGCTCGC TATAGGTAAG ACAATGGAAC AGGTTCCGAA GATCGCTTCT
CGGGTCTGCG GTATCTGTCC TATTGCCCAC ACCCTGGCAA GCACCGAAGC CATGGAGGCT
TCGATCGGCT GCGAAATCCC CACGGATGCA AAGCTCCTGC GGACCATTCT CCATGCCGCG
AACCGTATCC ATAGCATCGC CCTGCACAAC ATCCTGATCC TCCCGGACTT TTACATTCCT
GGGACGGAAA AGAAGTTTAA CCTGTTCGCC AACGAGCAGC CTGCCAGGAG TGTTATGGCT
AGAATTGTCC GCATCCGCGA GATTGCACAG ACAATTGGAG CCATCGCAGG TGGCGAGGCG
ATCCATCCAT CCAATCCGAG GATCGGCGGG ATGTACTATA ATGTGAGTCC CCGGGCAAAG
CAAAAAATGG CCGACCTGGC GAAAGAAGGT CTTGTTCTTG TCCACGAGCA GATGGAATTC
ATGTTTGATG TCATCAGGAA CATGCAGAAC AGGGAATTTG TAGAGGTCGC AGGCAAACAG
ATCCCACTTC CTAAGAAACT TGGGTATCAC AACCAGGGAG TTATGGCCAC AGCTTCGATG
TACGGGTCAT CCAGTCTGGA TGATAATCCT ACATGGGATT TCACTCGTTG GAAAGAAACC
CGTCCATGGG ATTGGTACAT GGGTGAGGTA ACAATCGATC TTGAGGATCC AAGCTACCCG
ATCGGAGGTA CCACGAAGAT CGGCACTAAA GCCAACCCCC AGATGGAGGC CTGCACAGGT
GTTCCTACCT ACGACGGACA GCCTGTTGAG GTTGGTCCGA GGGCAAGGCT TGCTACATTC
AAGAACTTCG ATGAGAAGGG TACTTTTGCC CAGCACATCG CCAGGCAGAT GGAATACCCA
GACTGCTGCT ACACCATACT CAGGTGCCTT GACAACCTGA ATACTTCAGG TAAGGTCCTT
GCCGACCATA TTCCCCAGGG AGATGGGTCC ATGGGCTGGG CCGCGAACGA GGCTCCGCGT
GGGAGTAATA TCCATCTCGC ACGGGTGAAG GACGGGAAAG TGTTGTGGTA TGATATGCTT
GTGCCTACCA CCTGGAACTT CCCGACCTGC AGCCGTGCTC TGACTGGAGC GCCCTGGCAG
ATTGCCGAAA TGGTCGTCCG GGCCTATGAC CCGTGCGTTT CGTGTGCAAC CCACATGATC
GTGGTGAACG AGGAGGAAAA GATAGTCACC CAGAAGCTCA TGCAGTGGTG A
|
|---|
| Protein sequence | MTKVVEISPT TRLEGHSKLT LKVDDQGIVE RGDWLSITPV RGIEKLAIGK TMEQVPKIAS
RVCGICPIAH TLASTEAMEA SIGCEIPTDA KLLRTILHAA NRIHSIALHN ILILPDFYIP
GTEKKFNLFA NEQPARSVMA RIVRIREIAQ TIGAIAGGEA IHPSNPRIGG MYYNVSPRAK
QKMADLAKEG LVLVHEQMEF MFDVIRNMQN REFVEVAGKQ IPLPKKLGYH NQGVMATASM
YGSSSLDDNP TWDFTRWKET RPWDWYMGEV TIDLEDPSYP IGGTTKIGTK ANPQMEACTG
VPTYDGQPVE VGPRARLATF KNFDEKGTFA QHIARQMEYP DCCYTILRCL DNLNTSGKVL
ADHIPQGDGS MGWAANEAPR GSNIHLARVK DGKVLWYDML VPTTWNFPTC SRALTGAPWQ
IAEMVVRAYD PCVSCATHMI VVNEEEKIVT QKLMQW
|
|---|
| |