Gene Mbar_A0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0450 
Symbol 
ID3624326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp548833 
End bp549714 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content53% 
IMG OID637699343 
Productcoenzyme F420-reducing hydrogenase, gamma subunit 
Protein accessionYP_304012 
Protein GI73667997 
COG category[C] Energy production and conversion 
COG ID[COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit 
TIGRFAM ID[TIGR03294] coenzyme F420 hydrogenase, subunit gamma 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTGC TTAACTCCAT CGAGAAAACC ATGGGCAAGG AAGCAAAGCT CGCTCTGGTT 
GCGATGGAGA ACAAGGCGGA AGCTACAAAG GAGAAAAAAC CAGTGACAAA TAAGATTAAG
ATCGGTCATG TACACATGAG CGGCTGTACC GGCTGCCTTG TGTCTCTGGC CGACAACAAC
TTAGGACTCA TCAAGATCCT GGACGACTAT GCCGACCTCG TATACTGCCT CACTCTCGCT
GACGTCCGGC ACATCCCAGA GATGGACGTT GCTCTCGTCG AGGGATCGGT CTGCCTCCAG
GACCATGAAT CAGTGGAGGA CATAAAGGAG ACGCGGAAGA AATCTAAGAT CGTGGTGGCC
CTCGGTTCCT GCGCATGCTA CGGGAACATC ACCCGGTTCA GCCGTGGCGG GCAGCACAAC
CAGCCACAGC ACGAGTCTTA CCTCCCAATA GGGGATCTCA TTGACGTGGA TGTTTACATC
CCAGGATGTC CCCCGAGCCC GGAGCTTATA AGGAACGTCG CTGTCATGGC GTACCTGCTT
CTTGAAGGGA ACGAGGAACA GAAGGAGCTT GCAGGCAAGT ACTTAAAACC CCTCATGGAC
CTTGCGAAGC GTGGCACTTC CGGATGTTTC TGCGACCTTA TGTACGATGT GATCAACCAG
GGCCTCTGCA TGGGCTGTGG CACTTGCGCT GCATCCTGTC CAGTGCATGC GATTACTCTT
GAGTTCGGGA AGCCTCAGGG CGAACGTGAC CTATGTATCA AGTGCGGTTC CTGCTATGGC
GCCTGCCCGA GGTCGTTCTT CAATTTAGAC GTGATTCCTG AATTTGAGAA CATCAACGAG
ATAATTGCTA ACGCGCTTAA GGAAGGTGAG AGTGATGATT GA
 
Protein sequence
MGLLNSIEKT MGKEAKLALV AMENKAEATK EKKPVTNKIK IGHVHMSGCT GCLVSLADNN 
LGLIKILDDY ADLVYCLTLA DVRHIPEMDV ALVEGSVCLQ DHESVEDIKE TRKKSKIVVA
LGSCACYGNI TRFSRGGQHN QPQHESYLPI GDLIDVDVYI PGCPPSPELI RNVAVMAYLL
LEGNEEQKEL AGKYLKPLMD LAKRGTSGCF CDLMYDVINQ GLCMGCGTCA ASCPVHAITL
EFGKPQGERD LCIKCGSCYG ACPRSFFNLD VIPEFENINE IIANALKEGE SDD