Gene Mbar_A0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0410 
Symbol 
ID3626973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp492434 
End bp493000 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content42% 
IMG OID637699304 
Producttetrahydromethanopterin S-methyltransferase subunit A 
Protein accessionYP_303973 
Protein GI73667958 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4063] Tetrahydromethanopterin S-methyltransferase, subunit A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.117541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.885996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGGC CTATAACTTC CGGAAACTAC GTAGTAGGAG ACACAAATTC GAGTGTAGCT 
GTAGTAACTC TTGCCTCTGA CTACAAGGAA TGGGGACTTA AGAACTATGC AATCTGTGGG
ACCTGTTTTA CTGCAAACTT TGGGATTGAA AAGATAATAA CTAATGTGCT TGCAAATCCA
AACATAAACT ACCTGGTCGT CTGCGGAAAA GAAAGCGCCC ACTGGGCAGG TCAGTCCCTG
GTTTCACTTG CCGAAAATGG AGTTTCCACA ATGGCAGGCT CAAGAAAAAT AATCGGTTCA
AAATCCCCAC TGTCCTACCT AAATGAAATT CCCATGACTG CAATCTCCCG TTTTATCAAG
GAAATAAAAA TCATAGACCT GATCGGAAAT AAAGACCCTG ACGCCATCCA GAAAGCAATC
GACTCCTGCA CCGGCCAGAA AAGAAGCGAA GCTTACATTG TCTCAATGCC CGAAATAGAT
GGAAGCAGCT GGAGAAAATA CGAGCATATA GTAAAAAATA ATGTGATGTC AAAAATAAAG
AAAGGGCGAA CAGAGGGTTG CTTTTAA
 
Protein sequence
MEWPITSGNY VVGDTNSSVA VVTLASDYKE WGLKNYAICG TCFTANFGIE KIITNVLANP 
NINYLVVCGK ESAHWAGQSL VSLAENGVST MAGSRKIIGS KSPLSYLNEI PMTAISRFIK
EIKIIDLIGN KDPDAIQKAI DSCTGQKRSE AYIVSMPEID GSSWRKYEHI VKNNVMSKIK
KGRTEGCF