Gene Mbar_A0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0351 
Symbol 
ID3626595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp408327 
End bp409637 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content45% 
IMG OID637699243 
ProductGTP-binding protein 
Protein accessionYP_303915 
Protein GI73667900 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR03156] GTP-binding protein HflX
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.304263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT CAGCTGAACA GAAATCCAAT AACGGATCCG GCAACGGTAA CAGGGTAATT 
CTCGTTAAAA GAACAATTCC CAATTCGGAC CCTGAACGTG AAGAATACCT CTTACAGGAA
CTCAGAGAGC TTGCAAAAGC TGCAGGCTAC CTGCCAGTTG GTGAGCTTAA GCAAACCAGG
TATCCTGATT CGAAGTACCA GCTTGGCCGG GGGAAAATTG AGGAACTTGC CGAACTTGTC
AGGAGTACGG GTGTAGAGAA AGTTATTTTC TATAACAGGC TCTCTACAAC TCAGCTATTC
AATATCTCGG AAATCTGCAG ATGCCAGATT ATCGATAAAT TCCAGCTCAT CCTTGAGATC
TTTGCAAAAA GGGCAACTAC CCATCGCTCA AAACTCCAGG TCGAACTGGC AAGACTGAGA
TACGAGGTGC CCAGGGCAAG AGCTGTTGTG TCTCTCCTTA AAAAGGAAGA AAGGGCAGGC
TTCATGGGGC TCGGAGACTA CGAGGATTCT TATGAACAGG ACCTGAAGAA GAGGATAACA
AGGATTCGTA ATGAACTTGA ATCTGCAGAA AAAGATGATG AATCTTTACG AGCTTTAAGG
CACAGGAAAG GCTTTTCCTT GATTTCCCTT GCAGGATATA CAAACGCCGG AAAAAGCACG
CTTTTCAATG CAATTGTAGA TGAAAGCGTT GAGGCAAAGA ACATGCTTTT TACAACACTT
GTGCCCATGA CCAGAGCTCT GGACCTCGGG GGGCGAAAAG CTCTTTTGAC CGATACCGTG
GGGTTTATAG AGGACCTTCC TCACTGGCTG GTTGACGCCT TCAAGTCCAC CCTTGATGAG
ATTTTTCTCT CGGACCTTAT ACTTCTGGTA GTGGATGCAA GCGAAAAACC CGAAACGATC
CTGCAGAAAC TTTCAACATC TCACGACACT CTCTGGGACC GGATACAGGG AGTTCCTATT
ATTACCGTAC TGAATAAAGC CGATCTGGTT GATGAATCCA AACTTGATGC CATTATGGAG
CAAATAGGTT ATATGGCCCC TAACCCGGTC TTTGTTTCCG CAAAAAAAGG CACCGGGATG
GCTGCATTAA AAGCCGAGAT AATAAAACAC CTGCCCCCCT GGTGTTTTTG CTCTCTTTCT
CTCCCCAATT CGGAAAAAGG AATGTCTATT CTCTCATGGC TATATGAAGA GGGAATCGTT
CACAGAGTAG AGTTCGGAGA GAGGATCTTT CTGGATTATG AAGCAAGAAC AGAGATAATT
AACAGAGCAC ATTCTCTTCT TGAACCTCAA GAAGCTCAAA TAAATGAGTG A
 
Protein sequence
MKISAEQKSN NGSGNGNRVI LVKRTIPNSD PEREEYLLQE LRELAKAAGY LPVGELKQTR 
YPDSKYQLGR GKIEELAELV RSTGVEKVIF YNRLSTTQLF NISEICRCQI IDKFQLILEI
FAKRATTHRS KLQVELARLR YEVPRARAVV SLLKKEERAG FMGLGDYEDS YEQDLKKRIT
RIRNELESAE KDDESLRALR HRKGFSLISL AGYTNAGKST LFNAIVDESV EAKNMLFTTL
VPMTRALDLG GRKALLTDTV GFIEDLPHWL VDAFKSTLDE IFLSDLILLV VDASEKPETI
LQKLSTSHDT LWDRIQGVPI ITVLNKADLV DESKLDAIME QIGYMAPNPV FVSAKKGTGM
AALKAEIIKH LPPWCFCSLS LPNSEKGMSI LSWLYEEGIV HRVEFGERIF LDYEARTEII
NRAHSLLEPQ EAQINE