| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0302 |
|---|
| Symbol | |
|---|
| ID | 3626817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 354215 |
|---|
| End bp | 354814 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637699194 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_303866 |
|---|
| Protein GI | 73667851 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1468] RecB family exonuclease |
|---|
| TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00784243 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTGATG AGACTACTAA GGAGAAAGAG AAATCTTTCG ATGGGTCTCT ATCTGAACCC
GAGAGAAGCA TTCATGCAGA AGTTTTCCTG GGATCAGTTC GAATTACCGG AGTTAAAGTC
AATTACTATC ATGTATGTGA GACAAAGCTC TGGCTTTTTT CTCATAATAT CAGCCTTGAG
AAAGAAAGCG ATAATGTCGC CATAGGAAAA ATGCTACATG AAGATCGCTA CAAGAAAAAT
TCAAAAAATA TTACTATTGA CGGTATAAGT ATTGATTTTG TTAAAACCGG AAAGAAACTT
GAGATTCATG AAGTAAAGAA AAGCAAAAAA ATCGATGTTG CCGATCGGGC TCAGCTTTTG
TTTTATCTTT ACTTTCTCAA GAAAAAAGGC ATCGATGCTG TGGGAGTCTT AAATTACCCT
CTTTTGAATA AAACTGAAAA AATAGAGTTA ACCCCGGAGG ATGAAGCCAT CACTGAAAAA
GATATCAAAA ACATCAAAAA TATAGTTCTT GGCTCCATGC CTCCACCAGA GCGCAAGAGA
ATCTGTTCAA AATGCGCCTA CAAGGAGTTC TGCTTTTGCG GGGATAGAGA TAGAGTATAA
|
|---|
| Protein sequence | MSDETTKEKE KSFDGSLSEP ERSIHAEVFL GSVRITGVKV NYYHVCETKL WLFSHNISLE
KESDNVAIGK MLHEDRYKKN SKNITIDGIS IDFVKTGKKL EIHEVKKSKK IDVADRAQLL
FYLYFLKKKG IDAVGVLNYP LLNKTEKIEL TPEDEAITEK DIKNIKNIVL GSMPPPERKR
ICSKCAYKEF CFCGDRDRV
|
|---|
| |