| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0275 |
|---|
| Symbol | |
|---|
| ID | 3624984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 325228 |
|---|
| End bp | 325944 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637699167 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_303839 |
|---|
| Protein GI | 73667824 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.228886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATAAGA TTTCAATTTA TGGAAAAATT ATAGATATTA CAACTCCGAT TTCCCCTTTT
ACGCAGATTT TTCCTGGAGA CCCAATACCT GAAATAGAAA AGGTCTGCAC TCTTGAAGAA
AAAGGCTGTG CTGTCTCAAA GTTAAGTTTT GGAAGTCATA CCGGCACCCA TGTTGATGCT
CCTTCTCATA TCCTGAAAAA TGGACTGACT ATTGACAAAC TGGAACTCAA AAACCTCATG
GGTACAGCCC TTATTCTCGA CTTTTCATCA CTATCAGGGG AACTGACTGC TGGCATTCTT
GAAACAGCCT TCCGGAAAAT GGAAGCTCCT GAAAATATCC CGATCCTACT TCTGAAGACA
GGAGTTTTTT CCCGGAAACA AGGAAACGCA GGTAAGGTTA GTTTCCCTGG CGAAGAGTCA
GACCCTCAAA GCATGGAATT CGAGAAGGAA AAATTTGGCT CTGCATACCT TGACGAAAGC
GGAGCAGCCT GGATTTTAGA AAACGGCTTC AAGACGATCG GGATTGATAG TTTTTCGGTG
GATAATTTTT ATTCCGAAAC TCTACCTGCG CATCACATCC TTCTTTCAGG TAATGTTAAC
ATAGTAGAAT GCCTTGAACT CAGCTCTATA GAAGCCGGGA CCTATTTCTT CATCTGCCTG
CCCCTCAAAA TTGAAGGTTG CGACGGCGCA CCTGCAAGAA CCTTGTTAGT TACTTAA
|
|---|
| Protein sequence | MNKISIYGKI IDITTPISPF TQIFPGDPIP EIEKVCTLEE KGCAVSKLSF GSHTGTHVDA
PSHILKNGLT IDKLELKNLM GTALILDFSS LSGELTAGIL ETAFRKMEAP ENIPILLLKT
GVFSRKQGNA GKVSFPGEES DPQSMEFEKE KFGSAYLDES GAAWILENGF KTIGIDSFSV
DNFYSETLPA HHILLSGNVN IVECLELSSI EAGTYFFICL PLKIEGCDGA PARTLLVT
|
|---|
| |