Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0236 |
Symbol | |
ID | 3626017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 277391 |
End bp | 279742 |
Gene Length | 2352 bp |
Protein Length | 783 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637699128 |
Product | hypothetical protein |
Protein accession | YP_303800 |
Protein GI | 73667785 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000717832 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.75423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAATA AAAAAAATAG AAGTTCAGAG TTTGCTTACC TCTGGATGAT AAAAAATAAA ATTAAAGAAA CTTACATATC TTTTTTACTG CAAGCTTTAA CTAAATTTCA AGGGTTGATA AGTAAACAAC TACCTCTAAA TACGAAAAGA AGAGAAATAT ATGATTTTGC TATTTTAAAT CTCCAGATAC TCAAACGCAG AGGGTTTGAA TTATTTATTC ACCAAGTTAA AAATCAAAAT TTTAAGAATT ATATCAAATC TTCAGAAATC CCAATTTTTG AATCAAAAAT CAGTAAATCT GATGGCGGTA TCTCTCTTGT TAAAACTTTG CAGGGAAAGT TCAATTTTCC AGCAAACAAC CTGAATAAAA TAAATATATT TACAATTAAT TCTCAAAAAG AAAATTTTAA GCTTAAACTG CAAATAATTA ATGAACAAAA AATGGTAATA AGAGAATCTA TAGTAAAAAG TGTTGAAATT AAAAATAATG AGTATACTTC ATTCAAATTT AAACCAATAA AAGAAAGCAA AGATAGAATA TTTAATTTTA GATTGCAATC CATAGGTGAA TCTTCGGCCT CAGTCTCATA CGAAAAAACA GATGAAACAA AGGAGTTAAC GTTATTTTAT GACGGTAACA ACTTTAATGA CAAAATTGGT TTTCAGGCGT TTTCAGACCT TGGAGTACAA TATGAATATG ACGTATGGAT GTTAAGAAAT ACTCTAACCG CCACAAAAAA AGAAAGATGT AGAAAAGAAG CACAAAACTT TGCTTATAAA CCCAAAATAA GCATAATAAT GCCGGTTTAT AATGTGGACG AAATCTGGCT TGAGAAAGCT ATTGATTCTG TTATAAATCA AATATATACC AACTGGGAAC TATGTATCGC CGACGATGCC TCTACAAAAC CTCATATAAA ATCCACTTTA TCTAAATATT CAGAATTAGA TTCCCGCATT AAAGTAAAGT ACCTGAGTAA CAATCGTGGT ATTTCGGGAG CTTCAAACGA AGCCCTACTT TTAGCTACTG GTGAATTTAT AGGATTACTT GATAACGATG ATGAATTAAG TGTCGATGCT CTTTATGAAG TTGTAAAAGT ACTAAACAAA AAATCTGATA TTGATCTTAT ATACAGTGAT GAAGACAAAA TTGATATGAA AGGAAATAGA TGCAACCCTT TTTTCAAACC TGGTTGGTCC CCTGATGTAT TATTCTCAGT AAATTATGTT TGTCATTTTG CCGTAATAAG GAAAACAATT GTAGACGAAG TAGGACGATT CAGAATAGGT TTTGAAGGAA GCCAGGATTA CGATCTATTT TTAAGAGTTG CAGAAAAAAC AAATCAAGTT GAACATATCC CAAAAATACT ATATCATTGG CGAATGATTC CGGGCTCAAC TGCATTAAAT ATTTTCTCTA AAGATAAAGC ACAGATTAAC GGTATCAGGT CATTACAGGA TTACTTATAT AGGAAAAAAA TAGATGGAAA AGCAGCTGCC ACTATAAATA GAACAAATTA CCAGGTAGAT TACGAGATAA AAGGGTCTCC ACTGGTTTCA ATTATTATCC ATTTTGATGA TAATGTGCAT GTTAAAAAGT GTATTAACAG CATTATCAAA AACACAGAAG AGACTAGATA CGAAATATTA CTCATGGTGT CTAAAAAGAA TGAAAAACAA TTGTCAATTA ATTTTGATCC TTCAAACAAA CAACCTGCCA TAAAAGTCTT AACATATGAT GAATCCTGGA ATGTGTCTGC TATTAATAAT TTTGCTGCAG AGAAGTCCAG TGGAGATTAT TTATTATTTA TGAATAGTAG AATAGAAACC ACTAATAGAA ACTGGCTAAT TTCTCTATTG AAAAACGCAG GAAGAGAAGG TATTGGTTGT GTTTGCCCGA AAATTCTCAA TGTTGATGGT ACAATTAAAC AGGCAGGAAT CATATTAGGT CTGAACGGTG AAAAATACGA TGTTTTTTCA GGTAATCCTG AAAACAACTG GACTAACTTT GGTTTGGATA CATGGTCCAG GGATTACCTT GCAGTCAGCG GAGAATGCTT GATGATAAAC AAAAAAACGT TTTTCCAAGC AGGCGGCTTT GATGAAAACA AATACTATGG AAATGATATT GATTTATGCT TGAGGGTACA TAAAAAAGGC TTTCGGAATC TTTGCATAGG AACAGTATCT GTATACCAGC TTGGAATAGG TCTAAGAAAG GATGAGATTT CACCCACTGA TGTACAGAGA ATTTTAGAAC CTTATAGGAT TTTTCTAGAA ACAGGAGACC CTTACTATAA TCCAAATTTG AGCTTGAAAG AAAAACTATG CAAGTTAGAA CTCATGCAGT AG
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Protein sequence | MDNKKNRSSE FAYLWMIKNK IKETYISFLL QALTKFQGLI SKQLPLNTKR REIYDFAILN LQILKRRGFE LFIHQVKNQN FKNYIKSSEI PIFESKISKS DGGISLVKTL QGKFNFPANN LNKINIFTIN SQKENFKLKL QIINEQKMVI RESIVKSVEI KNNEYTSFKF KPIKESKDRI FNFRLQSIGE SSASVSYEKT DETKELTLFY DGNNFNDKIG FQAFSDLGVQ YEYDVWMLRN TLTATKKERC RKEAQNFAYK PKISIIMPVY NVDEIWLEKA IDSVINQIYT NWELCIADDA STKPHIKSTL SKYSELDSRI KVKYLSNNRG ISGASNEALL LATGEFIGLL DNDDELSVDA LYEVVKVLNK KSDIDLIYSD EDKIDMKGNR CNPFFKPGWS PDVLFSVNYV CHFAVIRKTI VDEVGRFRIG FEGSQDYDLF LRVAEKTNQV EHIPKILYHW RMIPGSTALN IFSKDKAQIN GIRSLQDYLY RKKIDGKAAA TINRTNYQVD YEIKGSPLVS IIIHFDDNVH VKKCINSIIK NTEETRYEIL LMVSKKNEKQ LSINFDPSNK QPAIKVLTYD ESWNVSAINN FAAEKSSGDY LLFMNSRIET TNRNWLISLL KNAGREGIGC VCPKILNVDG TIKQAGIILG LNGEKYDVFS GNPENNWTNF GLDTWSRDYL AVSGECLMIN KKTFFQAGGF DENKYYGNDI DLCLRVHKKG FRNLCIGTVS VYQLGIGLRK DEISPTDVQR ILEPYRIFLE TGDPYYNPNL SLKEKLCKLE LMQ
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