Gene Mbar_A0235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0235 
Symbol 
ID3626016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp276203 
End bp277165 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content34% 
IMG OID637699127 
Productglycosyl transferase 
Protein accessionYP_303799 
Protein GI73667784 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000204956 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.587039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGCC CTAAAATTAT TATTATCATT CTCAACTGGA ATGGTAAGGA AAATACGATA 
AATTGCCTTG AAGCTCTCAA GCTAACAACA TATCCTAATT ATAAGATCAT AGTAGTCGAT
AATGGATCTA CAGATGGATC TGTAAAACAT TTCAAAGATC ATTATCCTGA AGTTAAACTC
ATTGAAAACA AGAAAAATCT CGGATTTGCT GAAGGGAATA ATGTAGCTAT AAGAGAAGTC
TTGGCAAGAC CAGAAATTAA GTACATTGCT TTGCTGAATA ATGATACAAT AGTAAAACCT
GATTGGCTGG AAAAACTCGT AAATGCTCTG GAGTACGATG AAAACATAGG CTCCTGCCAG
CCAAAGATAT TGTCATTAAG TAATCCGGAT ACAATCGACG CAGTTGGGAT TTATATTAGC
AAGAATGGAG GAGCGTATCA GAAAGGTCAC AACGAAAAAG ACCTCGGCCA ATATGACAAG
ACTACAGAAG TATTCGGAGT ATGTGCGGGT GCTGCTCTAT ATAGAGTAAA AATGTTAAAT
CAGATAGGTA TCTTTGATAA AGATTTTTTT GCTTATTATG AAGATGTTGA CCTTGCTATC
CGCGCAAGGC TATTTGGATG GAAAAGCGTT TGTGTTCCTC AAGCTGTGAT TTATCACATA
CATTCTGCTA CCCTTGGTGA CGATTCCCCC TTTAAGACGT ATCTTCTTGA AAGAAATTCA
TACTATTATG TTTTTAAGAG TTTGCCTCGA AAAGTTATTC TATCATTTTT GATCTGGAAA
GCTCGTTTCA TTTTTTTCAC ATTATATGAT TTAACTAGAA ACAAAAAATT CAATATAATA
AAATCTATGA TTAAAGGAGA TCTAGCTGCT CTTGGAAATC TTCCTGTTAT TATCTCTAAA
AGATCCGAAC TTCAAAATAA AAAAATAGTT TCTGAAGAAG ATTTTATGAT GTTGTTGAGG
TAA
 
Protein sequence
MDCPKIIIII LNWNGKENTI NCLEALKLTT YPNYKIIVVD NGSTDGSVKH FKDHYPEVKL 
IENKKNLGFA EGNNVAIREV LARPEIKYIA LLNNDTIVKP DWLEKLVNAL EYDENIGSCQ
PKILSLSNPD TIDAVGIYIS KNGGAYQKGH NEKDLGQYDK TTEVFGVCAG AALYRVKMLN
QIGIFDKDFF AYYEDVDLAI RARLFGWKSV CVPQAVIYHI HSATLGDDSP FKTYLLERNS
YYYVFKSLPR KVILSFLIWK ARFIFFTLYD LTRNKKFNII KSMIKGDLAA LGNLPVIISK
RSELQNKKIV SEEDFMMLLR