| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0234 |
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| Symbol | |
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| ID | 3626015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 274770 |
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| End bp | 276200 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 637699126 |
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| Product | lipopolysaccharide O-side chain biosynthesis protein (O-antigen transpoter) |
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| Protein accession | YP_303798 |
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| Protein GI | 73667783 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00421263 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.454805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACTACAG TTAAAAAAAT AGCCAGGAAC AATTTATTCT TATTTTCTGG TCAAGTAATA
AGTCTAGCTC TTGGCTTATT TTATTTTGCT TATATGGCCG GATATTTAGG GGCTAAAAAT
TTTGGAATAC TGAATACAGC AATCTCTCTT ACTTTAATTA TCGGACTTTT AGGAGATCTT
GGATTAAGCT CGTTAATGAC AAGAGAAGTT TCACGTAATC AGTCTCTGGC CCCCAAGTAT
CTTGGAAATA TTCTCTTAGT TAAAGTTTTA TTAGCAGTAG TTACTTTTGC AGTTGTTGTA
GTTGTAGCAA ATACTCTTGG TTATTCTGAG CAGTCAATAA AGGTAATTTA TATAATTATG
TTATCTACTA TTGCAACAAA CTTCACTCAG GTTTTTACTT CAATTTTTCA AGCATTTGAA
AGATTTGAGT TCCAATCTTT TGGTGTAATT CTAAATAGTA TACTGATGAC AGTAGGTATT
ATATTTTCAG TATACCAGAA ACTTGATTTA ATTTACTTTG CCCTTGTTTA CTTTATTGTA
AACTCAATTA TTTTATTGTA TAGTTTTTTT ATTTGTCTGA GAAAATTAAC ATTTCTTGAT
TTTAACATTG ATTGGGCTTT CTTGAAACAA ATAATATCAG AATCATTGCC ATTCTGGTTA
AATAGTGTTT TTGTTCTGAT ATATTTTAAA ATAGACATGG TAATGCTTTC GATAATAAAT
GGGGACATCG CAGTTGGATT GTACTCAGCC CCTTATAGGT TAATAGATGC ACTTAGCTTC
ATACCTGTAG TTCTTATGAG TACTATGTAC CCGGTATTTT CAAAATTCTA TGTTAGTTCA
AAAGAATCTC TGGAATTTGC TTTTAAAAAA TCATTTAAGT TTTTAACAAT TATTGCAATT
CCAATTGGTA TTGGAACTAC GATTTTAGCA GAAAGAATTA TTTTGTTAAT ATATCGTGAT
GTACAATATT CTCCTTCAGC TGTTGCTTTA CAAATTTTAA TATGGGCAAG TGTTCTGAGT
TTTATCAACT ATGCCCCTTC AACTTATTTT TCGTCTACAA ATAGACAGCG AGCTCTCATG
ATATTCACCT TCATAGGAGC GGTTCTTAAC ATATGTTTAA ACTTCATATT AATTCCTCGA
TTCAGTTATA ACGGAGCAGC TATTGCAACT GTCTGTTCCG AATTAGCTGT GGGAATACTG
ATGATTTCTA ATATACACGA AGTACAAAAC TTATCTGCTT TATTAACTGG TGTTATACTT
AAATCGTTAG TAGCAGGAGC TTTTATGGGA TTATTTCTGT TAATTTTCCA TAATTTCACA
TTGATATTGC TAATATTATT TGCAGCAATT ATATACTTTG TTGTCCTGTA TATTGTAAAT
GGTTTCGAAA AGGAAGAGAT CAATTTATTT AATCAGGTGT TTGGAAGATA A
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| Protein sequence | MTTVKKIARN NLFLFSGQVI SLALGLFYFA YMAGYLGAKN FGILNTAISL TLIIGLLGDL
GLSSLMTREV SRNQSLAPKY LGNILLVKVL LAVVTFAVVV VVANTLGYSE QSIKVIYIIM
LSTIATNFTQ VFTSIFQAFE RFEFQSFGVI LNSILMTVGI IFSVYQKLDL IYFALVYFIV
NSIILLYSFF ICLRKLTFLD FNIDWAFLKQ IISESLPFWL NSVFVLIYFK IDMVMLSIIN
GDIAVGLYSA PYRLIDALSF IPVVLMSTMY PVFSKFYVSS KESLEFAFKK SFKFLTIIAI
PIGIGTTILA ERIILLIYRD VQYSPSAVAL QILIWASVLS FINYAPSTYF SSTNRQRALM
IFTFIGAVLN ICLNFILIPR FSYNGAAIAT VCSELAVGIL MISNIHEVQN LSALLTGVIL
KSLVAGAFMG LFLLIFHNFT LILLILFAAI IYFVVLYIVN GFEKEEINLF NQVFGR
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