Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0230 |
Symbol | |
ID | 3626011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 271643 |
End bp | 272194 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637699122 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_303794 |
Protein GI | 73667779 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.433521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.761753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGATAA TAGAAACAAA AATAAAAGAT CTCTATATGC TTGAGCCAAA AGTATTTGAA GATGACCGGG GCTATTTTCT TGAAAGTTAT AATAAGAAAA CACTGGACAG CCTTTTAGAA AAAGAATACA CTTTTGTCCA GGATAATGAG TCAAAATCAT CTTATGGAGT AATTCGTGGC CTACACTACC AGCTGGGTCC CTTTAGTCAA GCGAAACTTA TACGAGTTGT ACAAGGTAAA GTCTACGATG TTGCAGTAGA TCTAAGGAAA AATTCCCCTA CTTTTCTGGA TTGGGTTGGG GTTGAACTCT CCGCTGAAAA CAAAAGGCAG TTTTTAATTC CTAAAGGCTT TGCTCATGGA TTTTCCGTAC TGAGCGAAAC TGCCATCTTT CAATATAAAT GTGATGAATA CTACCATCCT GAAGCTGAAG CAGGGATTAT CTATAATGAC TCATCATTGA ATATTGACTG GAAGATAAAA GCTGAGGATA TAAAGACCTC TCCGAAGGAT CTGTTACTCC AAAAATTAGA AGAAGCTAAA ATGAATTTTT AA
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Protein sequence | MKIIETKIKD LYMLEPKVFE DDRGYFLESY NKKTLDSLLE KEYTFVQDNE SKSSYGVIRG LHYQLGPFSQ AKLIRVVQGK VYDVAVDLRK NSPTFLDWVG VELSAENKRQ FLIPKGFAHG FSVLSETAIF QYKCDEYYHP EAEAGIIYND SSLNIDWKIK AEDIKTSPKD LLLQKLEEAK MNF
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