Gene Mbar_A0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0228 
Symbol 
ID3626009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp267640 
End bp268485 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content46% 
IMG OID637699120 
Productferredoxin-NADP(+) reductase subunit alpha 
Protein accessionYP_303792 
Protein GI73667777 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.852215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATATA AAGTATTGAA TAAGGAAGAA ATCGCTCCGT CGGTGCACAG GATGGTAATA 
GATGCCCCTG ACGTAGCAAA GGCTGCAAAA GCCGGACAGT TCATAATCCT CCGAATTGAC
GAAAAGGGGG AAAGAATTCC ACTTACGATT GCTGATTTTG ACAAAGAAAA GGGCACAGTA
ACCGTAATAT TTCAGGAAAT GGGCAAGACT ACAAAACAGC TTGCAAAGTT TTCTGCAGGC
GAGTTTCTCG AAGACGTCGT CGGACCTCTT GGCACTCCTT CCGATGTAAG GAAACTTGGC
ACTGTTATTC TTGTAGGTGG AGGAGTAGGA GTTGCCCCGG CTTATCCCCA GGCAAAGGCT
TATAGCAAAG CGGGCAACAA GGTAATTTCC ATTATAGGAG CTCGAAACAA GGACCTTCTT
ATTCTTGAAG ACGAGATGAA AGATGCCAGT TCTGAACTGT ATATTGCAAC CGATGACGGA
TCAAAAGGGC ACCACGGATT TGTTACCGAT ATAATGAAAC AGATTCTGGA TAGCGGGGAA
GAGGTTGCAA GAGTTGTAAT TATTGGACCC CCTATAATGA TGAAAGTAGG GGCAGGAGTA
GCTGCTCCCT ATGACGTTGA AATTCTGGTC AGCCTTAACT CTATTATGGT AGACGGGACA
GGTATGTGCG GCGGTTGCAG GGTTACAGTT GACGGAAAAA CCAGATTTAC CTGCGTTGAC
GGGCCTGAAT TTGATGCACG GAAAGTTGAT TTTGTTCAAC TCATGAACAG GCTTGCAATG
TACCGCGGCG AAGAAACAAA AGCTGTGGAA AAATACGATG AAGAATGCAG GTGTGGACTG
CACTAA
 
Protein sequence
MAYKVLNKEE IAPSVHRMVI DAPDVAKAAK AGQFIILRID EKGERIPLTI ADFDKEKGTV 
TVIFQEMGKT TKQLAKFSAG EFLEDVVGPL GTPSDVRKLG TVILVGGGVG VAPAYPQAKA
YSKAGNKVIS IIGARNKDLL ILEDEMKDAS SELYIATDDG SKGHHGFVTD IMKQILDSGE
EVARVVIIGP PIMMKVGAGV AAPYDVEILV SLNSIMVDGT GMCGGCRVTV DGKTRFTCVD
GPEFDARKVD FVQLMNRLAM YRGEETKAVE KYDEECRCGL H