| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0205 |
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| Symbol | |
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| ID | 3626296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 242350 |
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| End bp | 242973 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637699096 |
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| Product | rhomboid protein |
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| Protein accession | YP_303769 |
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| Protein GI | 73667754 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0326633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCAGGTA AAGACTATAT TTTCGCAAGC CCGTCAATAG CAATCATTGC CCTTTGCACA
CTTTCATTCT TCCTGGAAAT GATTCCGGGC ATAGGTGATG CCTATTTTAA CGCTTTTTAT
TTTGACCCAA ATTATCTTAT AACAAGGCCA TGGACGCTTA TTACATACAT ATTTCTACAC
AACGGTTTAG TCCATCTATT ATTCAACATG CTCGTCCTGT ACTTTTTCGG GACTGCACTT
GAGCGACGGA TAGGGAACAG ACAGCTTCTG GCAATTTTTT TCACAGCCGG AATTTTATCG
GCAATAGGAT ATACCTTTTT AACTCAGCCA ATTTTCAATA TATCTCCTGG CCCAATGGTT
GGCGCAAGTG GAGCAATCTA TGGAGTCTTT GCAGCCCTTA CAATACTTGA GCCGGATATT
CGTGTATATG TTTACTTCGT CCCGATGAAG TTAAAACATG CCCTGGTGCT TTTTGCTCTA
TTTGACTTTC TGATGATTAA CTCATCGGAC ATGATAGCCC ATACAGCCCA CCTTAGCGGT
CTCTTTGTAG GTCTGTATAT GGGTTTCCGC ATAAAGAAAA TTCAGGAAAA TGCTCTGAGA
TCCAGATACA TAGGCAGGTG GTAA
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| Protein sequence | MAGKDYIFAS PSIAIIALCT LSFFLEMIPG IGDAYFNAFY FDPNYLITRP WTLITYIFLH
NGLVHLLFNM LVLYFFGTAL ERRIGNRQLL AIFFTAGILS AIGYTFLTQP IFNISPGPMV
GASGAIYGVF AALTILEPDI RVYVYFVPMK LKHALVLFAL FDFLMINSSD MIAHTAHLSG
LFVGLYMGFR IKKIQENALR SRYIGRW
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