Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0169 |
Symbol | |
ID | 3624472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 192941 |
End bp | 193318 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637699058 |
Product | nitrogen regulatory protein P-II |
Protein accession | YP_303734 |
Protein GI | 73667719 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0347] Nitrogen regulatory protein PII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00936567 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.629139 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAGA TTACTGCGAT AATTAGGATG AACAAAGCCC AGAGAACTAA AGATGTCCTG CTTGAATGCG GCTTTCCTTC ATTTACCGTA AGAAGGGTTA TGGGCCGCGG GAAACAAAGA GGGCTTTGCC ATGAATTTAA TCCCCCTCTG CCAGATCCGG AAAAGGAAGC TGAGACCTGT ATTCGCTTTA TCCCAAAACG AATGTTCACA ATCGTTGTGG ATGACGAAAA TGTAAGTGAA GTGGTCCAGA AAATCATAGA AATTAACCAG ACCGGAAATG CAGGAGATGG AAAAATTTTC GTTTCAGACG TTACTGAAGC AATCCGTATC CGGACTGGAG AAAGCGGAGA GGCGACAGTA AATAAGGAGC TGGTATGA
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Protein sequence | MKEITAIIRM NKAQRTKDVL LECGFPSFTV RRVMGRGKQR GLCHEFNPPL PDPEKEAETC IRFIPKRMFT IVVDDENVSE VVQKIIEINQ TGNAGDGKIF VSDVTEAIRI RTGESGEATV NKELV
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