Gene Mbar_A0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0169 
Symbol 
ID3624472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp192941 
End bp193318 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content44% 
IMG OID637699058 
Productnitrogen regulatory protein P-II 
Protein accessionYP_303734 
Protein GI73667719 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00936567 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.629139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGA TTACTGCGAT AATTAGGATG AACAAAGCCC AGAGAACTAA AGATGTCCTG 
CTTGAATGCG GCTTTCCTTC ATTTACCGTA AGAAGGGTTA TGGGCCGCGG GAAACAAAGA
GGGCTTTGCC ATGAATTTAA TCCCCCTCTG CCAGATCCGG AAAAGGAAGC TGAGACCTGT
ATTCGCTTTA TCCCAAAACG AATGTTCACA ATCGTTGTGG ATGACGAAAA TGTAAGTGAA
GTGGTCCAGA AAATCATAGA AATTAACCAG ACCGGAAATG CAGGAGATGG AAAAATTTTC
GTTTCAGACG TTACTGAAGC AATCCGTATC CGGACTGGAG AAAGCGGAGA GGCGACAGTA
AATAAGGAGC TGGTATGA
 
Protein sequence
MKEITAIIRM NKAQRTKDVL LECGFPSFTV RRVMGRGKQR GLCHEFNPPL PDPEKEAETC 
IRFIPKRMFT IVVDDENVSE VVQKIIEINQ TGNAGDGKIF VSDVTEAIRI RTGESGEATV
NKELV