| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0109 |
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| Symbol | rpl4lp |
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| ID | 3626231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 116050 |
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| End bp | 116811 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637698999 |
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| Product | 50S ribosomal protein L4P |
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| Protein accession | YP_303676 |
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| Protein GI | 73667661 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTACAG CAAAAACAAT AGACCTTACA GGGAAGGTTG TCAGGGAGAT TGAGCTTCCC
GACGTGTTTG ATGTGGATTA CCGACCTGAC CTGATTAAAA AGGCAGTGCT TGCGGCACAG
GCAAACAGGC TTCAACCCTA TGGTCCCCGT CTCTATGCAG GCATGGAAAC TTCCGCAAGA
GGCTGGGGTT CGGGGCGAGG CACATCCCAT GTTCCGAGGC TCGTAAACAG CAGCAGAGCT
GCAAGAGTCC CGCACGCAAG AGGCGGAAGA AGAGCCCACC CACCAAAGCC GGAAGCTGAC
AGAAGCGAGA AAGTCAACAC CAAAGAACGC CGCTATGCAA TCCGCTCTGC AATCGCAGCA
ACCAGAGACC CGACCCTCGT AAGCCTGAGA GGCCACATCT TTGAAGCCGA GCTTCCTATT
GTTACGGAAA ACGCTCTTGA AGACTTGGAT AAGACAAAGC AGGTAATAGA ATTCCTGCAG
GCTATAGGAG TCTATGAAGA CGTGCTCAGG GCAAAATACG GAAGACACAT CAGGGCCGGC
CGCGGAAAGC TCAGAGGCAG GAAATACAAG CACAAAAAGA GCGTCCTTAT TGTTGCAGGG
GAAAGCGCCC CTATCCTGAA GGCTGCAAGA AACCTTTCAG GGGTAGATGT TGCAACAGTG
GATTCACTGA ATGCCGAATT GCTCGCACCT GGCACTCACG CAGGGCGCCT TACTATCTGG
ACAGAGTCCG CAGTTGAGAA ACTGGAAGGT GCATTCCAAT GA
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| Protein sequence | MATAKTIDLT GKVVREIELP DVFDVDYRPD LIKKAVLAAQ ANRLQPYGPR LYAGMETSAR
GWGSGRGTSH VPRLVNSSRA ARVPHARGGR RAHPPKPEAD RSEKVNTKER RYAIRSAIAA
TRDPTLVSLR GHIFEAELPI VTENALEDLD KTKQVIEFLQ AIGVYEDVLR AKYGRHIRAG
RGKLRGRKYK HKKSVLIVAG ESAPILKAAR NLSGVDVATV DSLNAELLAP GTHAGRLTIW
TESAVEKLEG AFQ
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