Gene Mbar_A0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0105 
Symbolrpl22p 
ID3626227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp114185 
End bp114640 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content43% 
IMG OID637698995 
Product50S ribosomal protein L22P 
Protein accessionYP_303672 
Protein GI73667657 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.379943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAA TTAATTACTC AGTTAAAGAA GACCCTGAGA CTACCTCTAA AGCCATGGGT 
TCTGAACTCC ATATTTCCCC TAAAAAGTCT CGTGAAGTCT GCTGCAAAAT TAAGGGTATG
AAGGTTCCTG AAGCAAGAAA GTTTTTAGAA GATGTAATTG CTTTAAAGCA GGCAGTTCCC
TTCAAAAGAC ATCATGATGG ATCAGGACAC CGAAAAGGTC CAATGGCTGC AGGCAGGTAT
CCTGTTAGTG CTTCAAAAGA GATCCTCAAG ATCTTGAGGA ATGCAGAAAG CAATGCCGAA
TACAAGGGCC TTGAACCCGC AAATATGTAT ATTACTCATG CCGCAATTCA GCGTGGGAGG
GTAATTCGTG GATTTATGCC TAGAGCTAGA GGACGGGCAA CACCCAAAGA CACAGAAACT
GTAAATATCG AGATGATTCT TTCCGAGGTG CGCTAA
 
Protein sequence
MARINYSVKE DPETTSKAMG SELHISPKKS REVCCKIKGM KVPEARKFLE DVIALKQAVP 
FKRHHDGSGH RKGPMAAGRY PVSASKEILK ILRNAESNAE YKGLEPANMY ITHAAIQRGR
VIRGFMPRAR GRATPKDTET VNIEMILSEV R