Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0105 |
Symbol | rpl22p |
ID | 3626227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 114185 |
End bp | 114640 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637698995 |
Product | 50S ribosomal protein L22P |
Protein accession | YP_303672 |
Protein GI | 73667657 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0091] Ribosomal protein L22 |
TIGRFAM ID | [TIGR01038] ribosomal protein L22(archaeal)/L17(eukaryotic/archaeal) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.379943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGAA TTAATTACTC AGTTAAAGAA GACCCTGAGA CTACCTCTAA AGCCATGGGT TCTGAACTCC ATATTTCCCC TAAAAAGTCT CGTGAAGTCT GCTGCAAAAT TAAGGGTATG AAGGTTCCTG AAGCAAGAAA GTTTTTAGAA GATGTAATTG CTTTAAAGCA GGCAGTTCCC TTCAAAAGAC ATCATGATGG ATCAGGACAC CGAAAAGGTC CAATGGCTGC AGGCAGGTAT CCTGTTAGTG CTTCAAAAGA GATCCTCAAG ATCTTGAGGA ATGCAGAAAG CAATGCCGAA TACAAGGGCC TTGAACCCGC AAATATGTAT ATTACTCATG CCGCAATTCA GCGTGGGAGG GTAATTCGTG GATTTATGCC TAGAGCTAGA GGACGGGCAA CACCCAAAGA CACAGAAACT GTAAATATCG AGATGATTCT TTCCGAGGTG CGCTAA
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Protein sequence | MARINYSVKE DPETTSKAMG SELHISPKKS REVCCKIKGM KVPEARKFLE DVIALKQAVP FKRHHDGSGH RKGPMAAGRY PVSASKEILK ILRNAESNAE YKGLEPANMY ITHAAIQRGR VIRGFMPRAR GRATPKDTET VNIEMILSEV R
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