| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0094 |
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| Symbol | rpl6p |
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| ID | 3626216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 109304 |
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| End bp | 109837 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637698984 |
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| Product | 50S ribosomal protein L6P |
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| Protein accession | YP_303661 |
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| Protein GI | 73667646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03653] archaeal ribosomal protein L6P |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000167517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTAAGG AAATTGCAAG AAAAATAGAG ATTCCTGAAG GAATTTCCGT TTCTTTCTCT
CAGGATGATG TGTTTACAGC CACAGGTCCT CTGGGAACTG TAGAAAGAAA ACTATGGTAT
CCTGGAATCA AGATCTACGT CAGAGACGGC GAAGTAGAGG TTGACGCGGA ATCTTCCAGG
AAAGAACAGA AAGCCATGGT AGGTACTTTT ACTTCCCACA TCAAAAACCT TATGAAAGGC
GTAAATGAGG GTTTTGAGTG CAAGATGACT ATCCTGTACG CTCACTTCCC AATGCAGGTA
AAAGTTGATG GTAAGACCCT CATAATCGGA AACTTCCTTG GAGAAAAGAA GCCAAGAATT
GCAAAAATCC TTGGTGAGAC AAAGGTTAAA GTTTCTGGAA ATGAGGTGAC TGTTTCCGGA
ATCAATAAGG AAGATGTCGG GCAGACTGCT GCAAATATTG AACAGAAGAC CAAGATCAAG
AGATTCGACC CAAGGATTTT CCAGGACGGA ATCTACATTG TGCAGAAGCC CTGA
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| Protein sequence | MVKEIARKIE IPEGISVSFS QDDVFTATGP LGTVERKLWY PGIKIYVRDG EVEVDAESSR
KEQKAMVGTF TSHIKNLMKG VNEGFECKMT ILYAHFPMQV KVDGKTLIIG NFLGEKKPRI
AKILGETKVK VSGNEVTVSG INKEDVGQTA ANIEQKTKIK RFDPRIFQDG IYIVQKP
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