| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0092 |
|---|
| Symbol | rpl19e |
|---|
| ID | 3626214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 108401 |
|---|
| End bp | 108853 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637698982 |
|---|
| Product | 50S ribosomal protein L19e |
|---|
| Protein accession | YP_303659 |
|---|
| Protein GI | 73667644 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2147] Ribosomal protein L19E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000444774 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATC TGGCCAATCA AAGAAGGTTA GCCTCCAAAA TTCTAGAATG CGGACTTGAC
AGGGTATGGC TTAATCCGGA AGCCTCCGAA GAGATCGCGT CGGCAATTAC CAGGGAAGAT
ATTCGCGGGC TCATTGAGAA CGGCACTATT AAAGCTAAGC CGATCAAAGG AGTCAGCAGA
GGCCGAGCCA GAGCTCTTGC TGCCAAGCGC AAGTATGGGC ACTGTAAAGG TCAAGGTTCA
AGAAAAGGTA AGAAAGGAGC CCGTACTCCT AAGAAGGAGC AGTGGATCAA AAAGATCCGG
GCGCTTAGAA GAAGACTCAA GGAACTGCGT GCAGATGGAA CACTTGATAA ATCCGTGTAC
TGCAGACTTT ACAGAAAAGC AAAAGGCGGC GAATACAGAA GTGTTGCTCA CCTTAATTCT
CACCTTGGGT CTGAAAAACT GTTAAAGAAA TAA
|
|---|
| Protein sequence | MSDLANQRRL ASKILECGLD RVWLNPEASE EIASAITRED IRGLIENGTI KAKPIKGVSR
GRARALAAKR KYGHCKGQGS RKGKKGARTP KKEQWIKKIR ALRRRLKELR ADGTLDKSVY
CRLYRKAKGG EYRSVAHLNS HLGSEKLLKK
|
|---|
| |