| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0088 |
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| Symbol | rpl15p |
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| ID | 3627583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 106328 |
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| End bp | 106750 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637698978 |
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| Product | 50S ribosomal protein L15P |
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| Protein accession | YP_303655 |
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| Protein GI | 73667640 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0200] Ribosomal protein L15 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0238604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATACAA AGAAGTTCAG AGGGTCCAGG ACCTGCGGAG GCGGGACTCA TAAAAACAGG
CGTGGAGCCG GAAACCGCGG AGGACGTGGA AAAGCCGGTG CCTGTAAGCA CCACTTTGTA
AGAGCTATGT TCAGGGGATA CAGCTACGGA AAGCATGGTT TCAATCTCCC TGCTGAGATC
TCCAGGGACG TTTCCATAGT AAATGTGGGA GAACTTGATG AACTTGCTCC TTACCTTGTT
GAGGAAGGGC TTGCAGAAAT CAAGGATGAT GCATACCACA TCAACCTTGA AAACCTTGGA
ATCGAAAAAG TACTCGGAAG CGGACGTGTT ATGAAGAACC TTGTTGTTAC TTCGGAAGGA
TTCTCCGCAT CTGCCCGCGA AAAAATTGAA GCCGCTGGTG GAAGTTGCAT CGATGCCGAA
TAA
|
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| Protein sequence | MDTKKFRGSR TCGGGTHKNR RGAGNRGGRG KAGACKHHFV RAMFRGYSYG KHGFNLPAEI
SRDVSIVNVG ELDELAPYLV EEGLAEIKDD AYHINLENLG IEKVLGSGRV MKNLVVTSEG
FSASAREKIE AAGGSCIDAE
|
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