Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0087 |
Symbol | |
ID | 3627582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 104707 |
End bp | 106185 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637698977 |
Product | preprotein translocase subunit SecY |
Protein accession | YP_303654 |
Protein GI | 73667639 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.023527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTCA GGGATACGTT AGAACCGTTT TTTAACAAGT TACCTGCAGT AGCAAGTCCG GAAAAACACG TCCATTTTAA GGATAAGCTC TGGTGGACTC TGGGAGTCCT TTTGCTGTAC TTTGCTCTGG CAAATGTACC GCTTTTTGGG ATGTCCCAGG ACTCGGTTGA CCTTTTTGAA TCTTACCGTG CCTTCTTTGC AGGTGCGTCT GGATCTCTAA TTCTCCTAGG TATCGGGCCT ATTGTCACGG CTTCGATTGT CCTGCAACTT CTTGTTGGAG CAGATATCAT TAAATTGGAC CTGTCAGATC CCAAAGATCA GTCATTCTTC CAGGGAGCTC AGAAGTTCCT TGTGTTTGTC ATGATCATAC TGGAAGCTCT GCCGCAGCTA CTTGGTGGAT ATATCCAGCC GGATCCAGGG CTCGCTTCTT CTCTAGGTGT AGGCCTGGGA GTAATCACCT TCCTGCTTCT TATCCAGATC TTTATTGGAG GCGCACTGAT CCTTTTCATG GATGAAGTGG TTTCCAAATG GGGCATCGGG TCAGGAGTCG GGCTTTTTAT TGTTGCGGGA ATCTCTCAGC AGATTGTTAC AGGAATCTTT AACTGGCAGC TTGATTCTTC CGGGCTCCCG GTCGGGCTGA TTCCAAAATG GATTTACATC GCCCAGAACG TTGGAGCAGA TTACCTTCTT TCAGGTGAGG GCGTGTTGTA TATGCTGGTC AGTGGAGGTA TTCTTGCGCT TCTAAGCACG ATTGTTATTT TCTTGCTTGT GGTGTACGTG GAAAGTACAA GAATCGAAAT TCCTCTCGCC CACAGTGCGG TTAGAGGAGC AAGGGGCCGT TTTCCTGTCA AGTTAATATA CGCATCAGTC TTGCCGATGA TCCTTGTCAG AGCTCTTCAG GCGAATATCC AGATGATTGG AATTATTCTT GCCAGCCGTG GAATCACTTT CTTTGGAGAG TTCCATGGGT CTACGCCGCT AAACGGGATT ATGTATTACC TTGCTCCAAT ACACAGTCCT TATGATTGGA TTCCATCTCT TGTAAGACAG TCCTTTTCAG GTTATGGGGC GGCTACACCT GCAAACTGGC AGATTGTACT TCATGTCTTT ACAGATGCTA CTATGCTTGT CGTAGGCGGA ATTATCTTTG CACTCTTTTG GATAGAAACA ACGGGTATGG GAGCTAAACC TACTGCACAG AAGATTTTCA ATTCCGGCAT GCAGATTCCA GGTTTCAGGC GAAATATTAG CAGTATTGAA AAAGTTACCC AGCGTTATAT CCCGAAAGTC ACCGTAATAG GTGGGGCTTT CATAGGGCTG CTGACGCTGA TTGCAAGCTT GCTCGGTACT CTTGGAAGTA CTAGTGGTAC AGGGCTTTTG CTGGCTGTCA GTATCGTATA TCGTCTCTAT GAGGACATAG CTTCCGAGCA GATGATGGAA ATGCATCCGA TGATCCGCTC CTTCTTTGGG GAACAGTAA
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Protein sequence | MTLRDTLEPF FNKLPAVASP EKHVHFKDKL WWTLGVLLLY FALANVPLFG MSQDSVDLFE SYRAFFAGAS GSLILLGIGP IVTASIVLQL LVGADIIKLD LSDPKDQSFF QGAQKFLVFV MIILEALPQL LGGYIQPDPG LASSLGVGLG VITFLLLIQI FIGGALILFM DEVVSKWGIG SGVGLFIVAG ISQQIVTGIF NWQLDSSGLP VGLIPKWIYI AQNVGADYLL SGEGVLYMLV SGGILALLST IVIFLLVVYV ESTRIEIPLA HSAVRGARGR FPVKLIYASV LPMILVRALQ ANIQMIGIIL ASRGITFFGE FHGSTPLNGI MYYLAPIHSP YDWIPSLVRQ SFSGYGAATP ANWQIVLHVF TDATMLVVGG IIFALFWIET TGMGAKPTAQ KIFNSGMQIP GFRRNISSIE KVTQRYIPKV TVIGGAFIGL LTLIASLLGT LGSTSGTGLL LAVSIVYRLY EDIASEQMME MHPMIRSFFG EQ
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