| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0078 |
|---|
| Symbol | rps13p |
|---|
| ID | 3627572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 94617 |
|---|
| End bp | 95105 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637698967 |
|---|
| Product | 30S ribosomal protein S13P |
|---|
| Protein accession | YP_303645 |
|---|
| Protein GI | 73667630 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03629] archaeal ribosomal protein S13P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTATA CATTCCCCTG GAGGGAATAT ATGGTAGAAG AAAAGAATAA TGAAGAAATA
AGGCATCTTG TTCGGATTAT GAATACCGAC CTGAAGGGGG CAAAACCCGT AGAGTATGCC
CTTACAGGTC TCCCGGGAAT AGGGAGGCGC ACCGCTATCC TTATCGCAAA AGGCGCAGGG
GTAGACCCTA CTGCTACACT TGGATATCTG CCAGATGAAG AAGTGGCAAA GCTAGACCGC
GCAATCGGAA ACTTTGAGGG AATTGTTCCA TCCTGGATGT TGAACAGGCA AAAAGACCTG
GCAACAGGAC AGGACAAGCA TCTGCTGGGA ACAGACATCT TACTGACTTT CAGGGAAGAT
ATTAACAACC TGAAGAAGGT TCGCGCCTAC AGAGGACTCA GGCATGAAAG GGGCCTTAAA
GTCAGAGGAC AGAGAACAAA ATCTACAGGT CGCCGCGGGT CAACTGTCGG TGTCAGTAGG
AGAAAGTGA
|
|---|
| Protein sequence | MLYTFPWREY MVEEKNNEEI RHLVRIMNTD LKGAKPVEYA LTGLPGIGRR TAILIAKGAG
VDPTATLGYL PDEEVAKLDR AIGNFEGIVP SWMLNRQKDL ATGQDKHLLG TDILLTFRED
INNLKKVRAY RGLRHERGLK VRGQRTKSTG RRGSTVGVSR RK
|
|---|
| |