Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0054 |
Symbol | |
ID | 3625526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 63786 |
End bp | 65372 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637698944 |
Product | dolichyl-phosphate beta-D-mannosyltransferase |
Protein accession | YP_303624 |
Protein GI | 73667609 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00397279 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0920189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATG AGCTGAAGCT GGGCAGCAGC TCGCAGTATA TGACTCAAAA TGAAAATCTG CGCGCTAAAG ACACGGTCCC CCAAAATGTA ACTGTGATTC TTCCGGTCTA TAATGAGGAA GTTTCAGTAG GTAGCGTGGT TTTACAGGCG AAGGAATTAG CCGATAAAGT AATTGTTATA GATGATGCAA GTTCGGACAA TACGATTGAA GTAGCTGAGC TTGCAGGTGC AGAAGTAATT CACAAAGTTG GGCATAGAGG GCCGGACTTT CCATTAACAA TGGGTATCCA ACATGCCTTA GATTCTGATG TTCTACTGTT TATGGACATC AGTATTTGCC ACGATTCCAA GCTAATTCCT GAAATGCTTG AGCCCATTCA AAAAGATGGT TTCGATATGG TAATCGGCAC CTGTTTTGTC CAATCAAACC GATTACAGGA AAACGTATCT TTTTTGAATG AGACGCAGAC AGAAAATGGA CCTATAGGAT TTTTTGCTTT TTCTAAACAA TGCTTTGAGA TACTAAGTTC CTCTGATATT TACATTTCTT CTGCAAGTGC CATTATTTCT TTTGCTGAAA ATAATAATCT GAAAGCAAAG CACCTTGATC TTAAAGAAGA GCACACATTC AGCCTTTTTA AAAAGTATCA CATCGGAGTT GTAGTGCCTG CATATAATGA GGAAGCTTTG TTAGGCAAAA CGATAATGGG AATTCCGGAG TATGTAAGCC GCATTTACAT AGTAGATGAT TGTAGTTCTG ATCGAACTCC TGAGGTGATC AAAAGTCTAA AAGATTCCAG AATAGTTTCC TTAAGGCATG AAGTGAATAT GGGAGCTGGA AAGTCCGTTG TTGACGGATA TAAAATGGCT CTGAAAGGCA AAATGGACAT AGTTGTTGTC ATGGATGGCG ACAACCAGAT GGACCCATCC CAGATGCCTC GTCTTTTAAT GCCTATAATA GAGGATAAGG CTGACTACAC TAAAGGAAAC AGGCTTATTA CCAGAAAAGC CAGAGAAGGA ATGAGCACCT GGCGGTTCAT TGGAAATTCT CTACTCTCAC TGCTGACTAA AATCGGAAGC GGTTACTGGG ACTTAATGGA CCCTCAAAAT GGTTATGCTG CTGCATCTCG AAAAGCTCTG GAAACAATCG ATCTTGATTC CGTATACACA TATTATGGCT ACTTAAATGA TATACTAATT AAACTCAATG CATACGGCAT GAGAGTAACT GATGTTGTAA TCCCTGCTCG TTATGGAAAT GAAAAATCCT CTATAAATTA TCGTAAATAT ATCTTAAAAG TTGCTCCCAT GCTCTTTAAA GGATTTCTCT GGAGGCTGAA AACCAAATAT ATACTTTTGA GCTTCCACCC ACTGGTGTTT TTCTATACTG CCAGCATGAT CCTTTTGCCC TGTGGACTGC TTTTTGATTT CTGGATATTG TTACAAAAAT TGATTCACAA TTCGGTTTCT CCAAACTATC CGCTGTTGGG CGTATTTGTT ACTTTGATGG GTATGCAGTT GTTGCTTTTT GCAATGTTCT TTGACATGCA GTCGGATATC AGCAAGAAAT TGGATCGTAG CTTTTAA
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Protein sequence | MSNELKLGSS SQYMTQNENL RAKDTVPQNV TVILPVYNEE VSVGSVVLQA KELADKVIVI DDASSDNTIE VAELAGAEVI HKVGHRGPDF PLTMGIQHAL DSDVLLFMDI SICHDSKLIP EMLEPIQKDG FDMVIGTCFV QSNRLQENVS FLNETQTENG PIGFFAFSKQ CFEILSSSDI YISSASAIIS FAENNNLKAK HLDLKEEHTF SLFKKYHIGV VVPAYNEEAL LGKTIMGIPE YVSRIYIVDD CSSDRTPEVI KSLKDSRIVS LRHEVNMGAG KSVVDGYKMA LKGKMDIVVV MDGDNQMDPS QMPRLLMPII EDKADYTKGN RLITRKAREG MSTWRFIGNS LLSLLTKIGS GYWDLMDPQN GYAAASRKAL ETIDLDSVYT YYGYLNDILI KLNAYGMRVT DVVIPARYGN EKSSINYRKY ILKVAPMLFK GFLWRLKTKY ILLSFHPLVF FYTASMILLP CGLLFDFWIL LQKLIHNSVS PNYPLLGVFV TLMGMQLLLF AMFFDMQSDI SKKLDRSF
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