Gene Mbar_A0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0052 
Symbol 
ID3625524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand- 
Start bp61030 
End bp62115 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content35% 
IMG OID637698942 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_303622 
Protein GI73667607 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0000167287 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0056305 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAATTG CAAGTATTGT TGGAGTCAGA CCTCAATTTG TTAAAGCTTC TGTAGTTTCA 
AGAGAATTAA GAAAAAAGAA TGAAGAAATT CTGATTCATA CGGGGCAGCA CTATGATTAT 
CAGATGAATA AACTTTTTTT TGAGGAGCTT AACATTCCCG AGCCTGAATA TCATCTTGAT 
ATTGGTTCTG GATCTCACGG ATATCAAACA GGTGAGATGC TAAAGAAGAT CGAAGAAGTT 
TTAATCAAAG AAAAGCCTGA TCTCGTCCTT ACCTACGGTG ATACCAATTC AACACTTGCA 
GGAGCTCTTG CCGCATCAAA GCTACATATC AAAACTGCGC ATGTTGAGTC TGGTCTCCGA 
AGCTTCGATA AGGCGATGCC AGAAGAGATC AATAGAATCG TAACAGACCA CTGCTCTGAT 
ATATTATTTT GCCCAACAGA AAATGCGGTT GAAAATTTAA AAAACGAAGG CATAACAAAA 
AATGTTTATT TAACCGGAGA TGTGATGGTT GATTCTCTAT TGTATAACAG GAAGATTGCA 
GAAGATAAAT CTACTATTCT AAATGATTTA GGCCTACAAA GCAAAGGGTA CCTTGTGGCC 
ACAATTCATA GAGCCAGCAA TACAGATAAT GAAGAAAATT TGAAAAATAT TGTAAATGCT 
TTTTCCGAAT TAAAGGAAAC TATTGTATTT CCATTACATC CCAGGACGGA TAAATTTTTG 
AAAAAATATG GACTCTATGA TAGATTGAAA TCATCTGTTA TTTTAATAGA GCCTTTGGGT 
TTTTTTGAGT TCATAAAGCT GATGAATAAT GCAAAGATGA TACTTACCGA TTCAGGTGGT 
GTGCAAAAAG AGGCTTATGT ACTCAAAGTT CCTTGCATCA CATTGAGGGA GAACACTGAA 
TGGATTGAAA CTGTCAACGA TGAATGGAAC GTTCTTGTTG GAACTAACAA GGAAAAGATT 
GTCAAAATGG TAAAGGAATT TCGACCTTTT TTAGAGAAAC ATAGAGATAG ATTCGGGAAT 
GGAGATGCAA GTAAGAATAT CTTATTAATT ATTGATTGTC TCAAAAAACA AGAGGTCAAT 
TTATGA
 
Protein sequence
MRIASIVGVR PQFVKASVVS RELRKKNEEI LIHTGQHYDY QMNKLFFEEL NIPEPEYHLD 
IGSGSHGYQT GEMLKKIEEV LIKEKPDLVL TYGDTNSTLA GALAASKLHI KTAHVESGLR 
SFDKAMPEEI NRIVTDHCSD ILFCPTENAV ENLKNEGITK NVYLTGDVMV DSLLYNRKIA 
EDKSTILNDL GLQSKGYLVA TIHRASNTDN EENLKNIVNA FSELKETIVF PLHPRTDKFL 
KKYGLYDRLK SSVILIEPLG FFEFIKLMNN AKMILTDSGG VQKEAYVLKV PCITLRENTE 
WIETVNDEWN VLVGTNKEKI VKMVKEFRPF LEKHRDRFGN GDASKNILLI IDCLKKQEVN 
L