Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0046 |
Symbol | |
ID | 3625518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 54551 |
End bp | 55108 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637698937 |
Product | hypothetical protein |
Protein accession | YP_303617 |
Protein GI | 73667602 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000164559 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0456795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTTAA AAATTCCTTT TAAGATATTA CGTTTAGCAA CTGCTTATGT AAGGATAAGG GTAAAAAATA TTATTCTCAA ATTGAAACTT GTTTTTGGAA AAAATGTGTT CATAGGAAGT AATGTTGTTA TAGATCCTGG ATACCATTGG TTAATTTCTA TTGGTAATAA TTCTGCTATT ACTAACGGTG TGACTATACT ATCTCATGAT GGCAGTCTTA GCAGACATAC TGGGTATACA AAAATAGGGA AAGTATCGAT TGGTTCTAAT ACTTTTATCG GTGTCAAAAG TATCATTTTA CCAGGCGTCA GTATAGGTAA TAATGTTATT ATTGGGGCGG GGAGTGTTGT TACAAAAGAC ATACCAGACA ATTCAGTTGC TATAGGGAAT CCAGCAGTAG TAGTGGGGTC TATTAAGGAT TATATTAATA AACATAAAAG AATGATAAGA ACATCTGAAG TCTATGAATG TCAATCCTTA CTAAAAGATA ATATCAGAGA TTTTAAGGGA GAGATTGGCT ACGTTAAGAC AAATTTTGAA AATCATGAGG ACCTATAA
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Protein sequence | MFLKIPFKIL RLATAYVRIR VKNIILKLKL VFGKNVFIGS NVVIDPGYHW LISIGNNSAI TNGVTILSHD GSLSRHTGYT KIGKVSIGSN TFIGVKSIIL PGVSIGNNVI IGAGSVVTKD IPDNSVAIGN PAVVVGSIKD YINKHKRMIR TSEVYECQSL LKDNIRDFKG EIGYVKTNFE NHEDL
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