Gene Mbar_A0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0043 
Symbol 
ID3625515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp53358 
End bp53696 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content35% 
IMG OID637698934 
Producthypothetical protein 
Protein accessionYP_303614 
Protein GI73667599 
COG category[L] Replication, recombination and repair 
COG ID[COG1662] Transposase and inactivated derivatives, IS1 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000166615 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0467802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGTTGA TAGAGTTAGG AAAAAAATTC ATCAACTGCT CTTTTGGCAG CAGAGGAACG 
GAAACTGGAC AACTAATATG GGAAAAATTA AAGCAAAAAG AGATTGGAGA AGTGATGACA
GATCACTGGA GAGCATATGC AGAGTTTCTT CCAGAAAATA TTCATACTCA ATCCAAAGCC
GAAACATATA CAGTTGAAGG ATATAACGGC ATATTGAGGC ACTTTCTGGC AAGGTTGAGA
CGAAAGACAA AATGTTATAC GAAGAGTATT GAAATGCTAA AGTACTCTGT TCTTCTATTG
ATGAAACATA GAAATAAAGA GATAGCTATA ATTAGTTAA
 
Protein sequence
MLLIELGKKF INCSFGSRGT ETGQLIWEKL KQKEIGEVMT DHWRAYAEFL PENIHTQSKA 
ETYTVEGYNG ILRHFLARLR RKTKCYTKSI EMLKYSVLLL MKHRNKEIAI IS