Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0034 |
Symbol | |
ID | 3627293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 41341 |
End bp | 42462 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637698925 |
Product | GDP-mannose 4,6 dehydratase |
Protein accession | YP_303605 |
Protein GI | 73667590 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0188537 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCAAAG TTGCATTAAT AACTGGAATT ACAGGTCAGG ATGGCGCTTA TCTTGCCGAA TTATTACTCG AAAAGGGATA CATTGTGCAT GGAATCAAGC GGCGATCTTC TTCTTTTAAC ACGGCAAGAA TTGATCATCT TTACAAAGAC CCCCATGAGA GAAATGTTAA TTTTTTCATG CACTATGGGG ATTTGACAGA TTCTACCAAT CTGATCCGCA TAATCCAGGA AGTTCAGCCT GATGAAATAT ACAATCTTGC AGCCCAGAGC CACGTTCAGG TATCTTTTGA GACTCCAGAG TATACGGCAA ATTCTGATGC TATAGGAACT CTCAGACTAC TAGAGGCTAT CCGCATCCTG GGTTTTGAAA AGAAAACAAG ATTTTACCAG GCTTCTACCA GTGAACTCTA TGGGAAAGTC CAGGAGGTCC CCCAGAAAGA AACTACTCCT TTTTACCCAA GAAGCCCGTA TGCCGCAGCC AAACTGTACG CATACTGGAT TACAGTCAAC TACCGGGAAG CCTATGGTAT TTTTGCATGT AATGGAATCC TTTTCAACCA TGAATCTCCA ATCCGTGGTG AGACTTTTGT GACAAGAAAA ATCACAATGG CGGCTACAAG GATAAAATAC GGCATGCAGG ATAGGCTTTA CCTTGGAAAC CTTGATTCAA AAAGAGACTG GGGTTTTGCA AAAGACTATG TAGAAGCCAT GTGGCTGATG CTCCAGCAAG AAGAGCCCGA CGATTACGTT ATAGCAACGG GCGAAACTCA CTCAGTCCGA GAATTTATTG AACTTGTGTT TAAAGAACTC GGAATCGATA TAATCTGGCA GGGAAAAGGA GAAGAAGAAG TCGGAATCGA TGCCCTTACA AATAAAATCT TAGTTGAAGT AGATCCTGAG TATTATAGAC CCACTGAAGT AGAAATGTTG ATTGGCGATT CATCAAAAGC CAGAAGAAAA CTTGGCTGGC AACCAAAAGT CAGACTGGAA GAACTGGTAA AGATGATGGT AAAGTCCGAT GAAGAAGAAG TCCTGAAAAG TTATCCTGCA GAGAAATTAG CTTCCAGTCA GGAAACTGAG GAAGAGTCAA TAAAATCAGA ATTAGATATC AGGAGTTTGT AA
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Protein sequence | MSKVALITGI TGQDGAYLAE LLLEKGYIVH GIKRRSSSFN TARIDHLYKD PHERNVNFFM HYGDLTDSTN LIRIIQEVQP DEIYNLAAQS HVQVSFETPE YTANSDAIGT LRLLEAIRIL GFEKKTRFYQ ASTSELYGKV QEVPQKETTP FYPRSPYAAA KLYAYWITVN YREAYGIFAC NGILFNHESP IRGETFVTRK ITMAATRIKY GMQDRLYLGN LDSKRDWGFA KDYVEAMWLM LQQEEPDDYV IATGETHSVR EFIELVFKEL GIDIIWQGKG EEEVGIDALT NKILVEVDPE YYRPTEVEML IGDSSKARRK LGWQPKVRLE ELVKMMVKSD EEEVLKSYPA EKLASSQETE EESIKSELDI RSL
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