Gene Mbar_A0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0033 
Symbol 
ID3627292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp39167 
End bp39910 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content45% 
IMG OID637698924 
Productdolichyl-phosphate beta-D-mannosyltransferase 
Protein accessionYP_303604 
Protein GI73667589 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0326174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAAAG AACGACTAGC GGGCAAGAGT GCCAAGTGCA CAGCCCAAAA ACAAAGCATG 
TGTGTGAAGA ACACAGCCCC GCAAAATGTC GTGGTGATCC TTCCTGACTA TAATGACGAA
GTTTCCATCG GAAGTGTAGT CCTGCTTACC AGATACTATG CTGACAGCGT AATCGTGGTC
GATGATGACA GCCCGAATAG GACAGCAGAA ATTGCAAGTA AAGCAGGAGC CGAGGTAATT
GTTCATGAGG TAAACAAAAG GAAAGGGGCA ACCCTCAAGA CCGTCTTTGC GGCTATATAC
GACCTGGGTG CAGATATTAT AGTTACCATG GACTCTATAG TTACCATGGA CTCCAATAGT
CACCATAACC CAGCCGAAAT CCCGAAGCTT TTCGGTCCTA TTATTATAGG TAAAGCCGAT
ATGGCCAACG GTAGCAGGTA TTTAAATGGC CTGGACAAGT ATACTCTTTC CTATTGCCGT
GTCGGTCAGA ATATTCTTGA CGGGGTTACC AAGCTAAACT CCGGGCTTCA GATTACCGAT
TCCCAGAGCG GCTTTCGTGC CTTTTCAGCC TTAACAAAAG ATATTTTTCG CTTCAAAGCT
CAGAAAATGT CTATAGAAAG CGAAATGCTG ACAGACGCAG GCAAACCTGG TCTTCGTATA
GTCGGAGTTG AAATTGGAGT CCGATATGAC GTTGACTGTT CAACTGTAAA CCCGATAAAA
CACGGCTTTG GAGTTTTCTT ATGA
 
Protein sequence
MSKERLAGKS AKCTAQKQSM CVKNTAPQNV VVILPDYNDE VSIGSVVLLT RYYADSVIVV 
DDDSPNRTAE IASKAGAEVI VHEVNKRKGA TLKTVFAAIY DLGADIIVTM DSIVTMDSNS
HHNPAEIPKL FGPIIIGKAD MANGSRYLNG LDKYTLSYCR VGQNILDGVT KLNSGLQITD
SQSGFRAFSA LTKDIFRFKA QKMSIESEML TDAGKPGLRI VGVEIGVRYD VDCSTVNPIK
HGFGVFL