Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0033 |
Symbol | |
ID | 3627292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 39167 |
End bp | 39910 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637698924 |
Product | dolichyl-phosphate beta-D-mannosyltransferase |
Protein accession | YP_303604 |
Protein GI | 73667589 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0326174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCAAAG AACGACTAGC GGGCAAGAGT GCCAAGTGCA CAGCCCAAAA ACAAAGCATG TGTGTGAAGA ACACAGCCCC GCAAAATGTC GTGGTGATCC TTCCTGACTA TAATGACGAA GTTTCCATCG GAAGTGTAGT CCTGCTTACC AGATACTATG CTGACAGCGT AATCGTGGTC GATGATGACA GCCCGAATAG GACAGCAGAA ATTGCAAGTA AAGCAGGAGC CGAGGTAATT GTTCATGAGG TAAACAAAAG GAAAGGGGCA ACCCTCAAGA CCGTCTTTGC GGCTATATAC GACCTGGGTG CAGATATTAT AGTTACCATG GACTCTATAG TTACCATGGA CTCCAATAGT CACCATAACC CAGCCGAAAT CCCGAAGCTT TTCGGTCCTA TTATTATAGG TAAAGCCGAT ATGGCCAACG GTAGCAGGTA TTTAAATGGC CTGGACAAGT ATACTCTTTC CTATTGCCGT GTCGGTCAGA ATATTCTTGA CGGGGTTACC AAGCTAAACT CCGGGCTTCA GATTACCGAT TCCCAGAGCG GCTTTCGTGC CTTTTCAGCC TTAACAAAAG ATATTTTTCG CTTCAAAGCT CAGAAAATGT CTATAGAAAG CGAAATGCTG ACAGACGCAG GCAAACCTGG TCTTCGTATA GTCGGAGTTG AAATTGGAGT CCGATATGAC GTTGACTGTT CAACTGTAAA CCCGATAAAA CACGGCTTTG GAGTTTTCTT ATGA
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Protein sequence | MSKERLAGKS AKCTAQKQSM CVKNTAPQNV VVILPDYNDE VSIGSVVLLT RYYADSVIVV DDDSPNRTAE IASKAGAEVI VHEVNKRKGA TLKTVFAAIY DLGADIIVTM DSIVTMDSNS HHNPAEIPKL FGPIIIGKAD MANGSRYLNG LDKYTLSYCR VGQNILDGVT KLNSGLQITD SQSGFRAFSA LTKDIFRFKA QKMSIESEML TDAGKPGLRI VGVEIGVRYD VDCSTVNPIK HGFGVFL
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