| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0029 |
|---|
| Symbol | |
|---|
| ID | 3627288 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 35843 |
|---|
| End bp | 37021 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637698920 |
|---|
| Product | glycosyltransferase |
|---|
| Protein accession | YP_303600 |
|---|
| Protein GI | 73667585 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000827208 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00854387 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT TACAGGTAAC TAATTTTTTC AAACCCTCTT GGGAAGCAGG TGGAATTGCA
AGGGTTGCCT ATGAAATTTC AAAAAATTTA GTACAACAGG GCCATGAAGT AACAGTTTTT
ACTACCGATG GATTTAAATC GAGGCTGAAA ACTATTAAGA ACAAGCCTGT TAATGTAGAT
GGAATAAATA CCTATTATTT CCGAAATCTG TCTAATTATT TAACAAAACG CAATATTGTC
ATCCCTTATT ATTTACCTTT TATCGCTAGA ATAAAAATTC AGGATTTTGA TGTTATCCAT
ATTCATGAGC ATCGGACATT GCTTGCAGTA ATCGTTCATT ATTATTCAAA AAAGTATAAT
ATTCCATATG TGTTACAAGC TCATGGAACA CTTCCAAACA CTATTGGTAA ACAGAATCTA
AAAAAGATAT TTGATGTTTT ATGGGGAAAT AAAATATTAA AGGATGCATC TAAGCTGATT
TCAGTATCCA ATACAGAAGT TGATCAATAT TTACAAATGA ATGTCCCTAT TGAAAAAATG
GTCATTATTC CAAATGGTAT AGATGTTGAT TCATTATCTA GCTTACCTGA AAAAGGTAGT
TTTAGAGCTA GGTACCATAT TAATCAAAAG CATGCGATAT TGTATTTAGG AAGGTTACAT
AAAATAAAAG GTGTTGATTT TCTACTCCGG TCTTTTGTAG AGTTGGTTAA AGATATCGAC
GATTCTGTAT TGATATTAGC TGGTCCGGAT GACGGTTATA AAGATAAAGC GAAAGAACAA
ATACGTGAGT TTGGTTTAGA AAAAAAGGTT ATTTTTACTG GATATATGGG ACCAATGGAT
AAAATTTCAG CTTATTTGGA TGCTGATATC TTAGTTTATC CCTCTTCTTT CGAAATATTC
GGGCTTGTTC CATTTGAGGC AATAATGTCT GGCACTCCTG TAATAGTTAC TGATGACTGT
GGGTGTAGCG AATTTATAAA AAGAGCTTCT TGTGGGTACT TAGTTAAATA TGGGGATGTA
ACTGATTTTA AATGCAAAAT GAGACTAATG CTTGAAAATC CTGAAATTGG GAACAAATTT
GTTGAGAATG GGCAAAAATA TATTACAAAT AATTTAACTT GGCCACTAAT TTGTAAAAAA
ATGGAGACCC TTTATGAGAA TTGTATTTAC AAAGTTTGA
|
|---|
| Protein sequence | MKILQVTNFF KPSWEAGGIA RVAYEISKNL VQQGHEVTVF TTDGFKSRLK TIKNKPVNVD
GINTYYFRNL SNYLTKRNIV IPYYLPFIAR IKIQDFDVIH IHEHRTLLAV IVHYYSKKYN
IPYVLQAHGT LPNTIGKQNL KKIFDVLWGN KILKDASKLI SVSNTEVDQY LQMNVPIEKM
VIIPNGIDVD SLSSLPEKGS FRARYHINQK HAILYLGRLH KIKGVDFLLR SFVELVKDID
DSVLILAGPD DGYKDKAKEQ IREFGLEKKV IFTGYMGPMD KISAYLDADI LVYPSSFEIF
GLVPFEAIMS GTPVIVTDDC GCSEFIKRAS CGYLVKYGDV TDFKCKMRLM LENPEIGNKF
VENGQKYITN NLTWPLICKK METLYENCIY KV
|
|---|
| |