Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0023 |
Symbol | |
ID | 3627282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 28012 |
End bp | 28968 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637698915 |
Product | UDP-N-acetylmuramate dehydrogenase |
Protein accession | YP_303595 |
Protein GI | 73667580 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0812] UDP-N-acetylmuramate dehydrogenase |
TIGRFAM ID | [TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000486691 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0088423 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGATAAAA TAAATAATTT GATTAATAAA AAAGTAGGAG ATATTTATTT AAAAGAACCT CTTTCAAAAC ACAGTAGCTG GCGTATTGGT GGTCCCGCAG ACGTTTTAAT TGAACCATAT AATATCAAAC AGATAATTGA AATTGTACAA TATGCTGATT TAATGAAAAT TCCCACGGTT GTTATAGGGA ATGGAACAAA TTTACTTTTT TGTGATGAAG GGCTTCGTGG AATCATTATA AAGTTGGGAA ATAATTTTTC TAGATATACT ATTAATGGTA AAAGGGTTTG CGCGGAAGCA GGTATCTGGA CTCCAAAATT TGCAAAAATA TTATCAGATA ATGGTTTATC AGGCCTTGAA CATGCTATTG GAATTCCAGG CACTCTTGGC GGACTTATTT TTATGAACGG AGGAAGCAGT GGAAAATGCA TAGGAGACAT TGTCAAAAAA GTATGGGCTG TTGACAAGAA TTATGATTTA ATATATTTAT CCCAAAAAGA ATGTGATTTT TCTTACAGAA AATCAGTATT TCAGGATTCA GATTATATTA TTTGTAAAAT TGAGCTAGAA TGTGAACTTG GAGAAAAAGA ACGAATAAAG TCCGAAATGA GAACTATACT AAATAACCGT AAGAACAAAT TTCCACTTAA TTATCCCAAT TGTGGATCTG TTTTTTTAAG TAATCCTGTT GTGAACGACA CTTTTGCACC TCCTGGAAAG TTAATTGAAG AAGCAGGTTT AAAAGGTTAT CAAATAGGTG GTGCTCAAAT TTCGGAAAAA CATGCCAATT TTATAGTAAA TCTGGGAAAT GCTACGGCTA AAGATGTGAT TTCTATTGTC CAATATATTC GAAAAGTTGT ATATCAACGT TACGGACTTT GTTTAGAAAG CGAAGTGAAG TATGTAGGAG AGCTGGGAAG TCTCAGATCA TTGCATGAGA TTGGAAAAGT TGAATAA
|
Protein sequence | MDKINNLINK KVGDIYLKEP LSKHSSWRIG GPADVLIEPY NIKQIIEIVQ YADLMKIPTV VIGNGTNLLF CDEGLRGIII KLGNNFSRYT INGKRVCAEA GIWTPKFAKI LSDNGLSGLE HAIGIPGTLG GLIFMNGGSS GKCIGDIVKK VWAVDKNYDL IYLSQKECDF SYRKSVFQDS DYIICKIELE CELGEKERIK SEMRTILNNR KNKFPLNYPN CGSVFLSNPV VNDTFAPPGK LIEEAGLKGY QIGGAQISEK HANFIVNLGN ATAKDVISIV QYIRKVVYQR YGLCLESEVK YVGELGSLRS LHEIGKVE
|
| |