| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0014 |
|---|
| Symbol | |
|---|
| ID | 3627600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 16069 |
|---|
| End bp | 16818 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637698906 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_303586 |
|---|
| Protein GI | 73667571 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0327] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0039713 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.167021 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTA TGAAAGTCGT AGAAATTCTC GAAGAAATCG CGCCACCTGA ACTTGCTGAA
GACTTTGACA AAGGCAGGAT CGGGCTAATT CTCAATTTGG AAAACAATAT AGAAAAAATT
GCAGTTGCCC TCGATGCCAG TTCTTACGTA CTTAAGAAAG CTGCAGAAAT GAGAGCAAAT
CTTCTGGTTA CCCACCACAC CCTTATCTTC CATCCGATAA ACAAAATTTC AAAATCCCTG
GCTGAATCCC TCAGGCTTGC CCTTGATAAC GGGATATCCC TTTACAGTAT GCATACAAAC
TATGATAGGG CCGAAGGAGG TATTAATGAT GTGCTTGCTG CAAGGCTCGG GTTAAAGAAT
CTCGAAAATG TGGAAATTGG CAGAATAGGA GAGATCGAAC CCTGTACTTC GGCTGAACTG
GCGTCTCATG TTTCGGAAAC CCTGAAAACT CCTGTCATGT ATGCCGGAGA AAAAAAGGGG
ATGAGGCGGG TAATGGTCTT CGGTGGCAGT GGCTTTGCAA ATGAGTTCCT TGAAATTGCA
AGGGCAAATA GAGTTGATGC CTTCATATCT TCTGAACTTA AGCATAATAT TCTCCGCGAG
TATGAGGATC TCTGCCTGAT TGACGCCACT CACTATGCTA CGGAAAATCC GGGCATGGAG
GCTTTATGCT CCAGACTACA TGAAATTTCG GGGCTTGAAG TGGAATTTAT CGAACAGCCT
TCCGGACTCA AGGCGATTAA TAAAACCTGA
|
|---|
| Protein sequence | MELMKVVEIL EEIAPPELAE DFDKGRIGLI LNLENNIEKI AVALDASSYV LKKAAEMRAN
LLVTHHTLIF HPINKISKSL AESLRLALDN GISLYSMHTN YDRAEGGIND VLAARLGLKN
LENVEIGRIG EIEPCTSAEL ASHVSETLKT PVMYAGEKKG MRRVMVFGGS GFANEFLEIA
RANRVDAFIS SELKHNILRE YEDLCLIDAT HYATENPGME ALCSRLHEIS GLEVEFIEQP
SGLKAINKT
|
|---|
| |