Gene Mbar_A0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0004 
Symbol 
ID3627590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3636 
End bp5111 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content48% 
IMG OID637698897 
Productargininosuccinate lyase 
Protein accessionYP_303577 
Protein GI73667562 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.52791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATA TTTTACGCAG AGGCAGGCTG GAGGCTGCCC AGGACGAGGA AATCTTACGT 
TATACCTCCT CTATGGAAGC TGACAGGTGG ATTTTTGATG CTGACATAGC AGTAGACCTT
GCCCACACAG TAATGCTAAA AGAGCAGGGC ATCATAAATA GGGAGGACTG CAGTAAAATC
CTTAGTGGGC TTTTAAAAAT CCGGGAGGAA GGGATGGAAA AGCTCGATTT CAGCTATGAA
GACATCCATA TCTCTCTTGA GTCAAGGCTC ATCGATATGG TTGGGGAAGA CGTTGGGGGC
AGGATGCATT CTGGGCGTTC CAGAAACGAT GAGGTTGCAA CTTGTATCAG GCTGGTGCTC
AGGGAAGAAC TGACCGGGCT GCTTGAAGAA ATCCATGAGC TGAGGCAAGC ACTTCTAACC
CTTGCGGAAA AACATACCGA GACGCTCATG CCTGGTTTTA CTCACATGCA GCATGCCCAG
CCGACAACAC TTGCTCATCA CCTCTGCGCC CACGAAGCCG CTCTTGGCAG GGACTTTGAC
AGGATTCAGG ACGCTTACTC CAGGGTAAAC CTCTGCCCGC TTGGGGCTGC AGCTTTTGCT
TCCACGGGTT TTAACCTGAA CAGGAAAAGG ACCCAGGAGC TTCTGGGCTT TGACGGCTTG
CTTGAAAATT CAATGGATGC GGTTAGCACC AGAGACTTTC TTATTGAATG CGCCTCAGGA
TTTACAAACC TCATGATAAA CCTGAGCCGT ATGGCTGAAG AACTTGTAAT ATGGTCCTCT
TCCGAATTCA ATTTCATAGA ACTGGACGAT ATGTACGCTT CTACTTCTTC AATCATGCCG
CAGAAGAAAA ATCCTGACAC TGCCGAACTT ATGCGCGGGA AAACAGGAGT AGCAGTGGGC
GCACTAATGT CTCTGATTAC AATCTGCAAA GGGCTTCCCC TGAGTTACAA CCGCGACCTT
CAGGAAGCAA CTCCAAATCT CTGGCGGTCT GTAGAAACGG TAAGGGCTTC AGTAAGGATC
ATGGAAGGGA TGATAAAAAC TATGAAAGTC CGTCCTGAAG TGCTTGTTGC CCAGTCAGTT
ACAGGTTTTA CAACCGCAAC CGAACTTGCG GATACCTTTG TCCGGGAAAC CGGAATTCCT
TTCAGGACTG CCCACCAGAT CGTCGGGATG CTTGCAAGGG AAATGGAAAA ACCAACTCTA
AAAAAAATCG ATTCCGTTGC CGAAATTGTG CTGGGCGAAT CTCTTTCAAG CCGTGGGCTC
AAGGAGAAAA TGGTAAAAGA AGCCCTGAAC CCATTTTCGA ACGTAGAGAT AAGAAAAATC
GCTGGCGGAC CAGCTCCCGA AGAAATGCGA AATTACCTCT CGAAAAGGCA GACCGAGCTT
GAACTTAACA GGCAGGAAAT TGCAACCCTG AAAGATATTA CAGACTCAGC TTTTGAAAAT
CTACTTGCAA CCGTTAATGA GTACAGGCAA GCTTGA
 
Protein sequence
MSNILRRGRL EAAQDEEILR YTSSMEADRW IFDADIAVDL AHTVMLKEQG IINREDCSKI 
LSGLLKIREE GMEKLDFSYE DIHISLESRL IDMVGEDVGG RMHSGRSRND EVATCIRLVL
REELTGLLEE IHELRQALLT LAEKHTETLM PGFTHMQHAQ PTTLAHHLCA HEAALGRDFD
RIQDAYSRVN LCPLGAAAFA STGFNLNRKR TQELLGFDGL LENSMDAVST RDFLIECASG
FTNLMINLSR MAEELVIWSS SEFNFIELDD MYASTSSIMP QKKNPDTAEL MRGKTGVAVG
ALMSLITICK GLPLSYNRDL QEATPNLWRS VETVRASVRI MEGMIKTMKV RPEVLVAQSV
TGFTTATELA DTFVRETGIP FRTAHQIVGM LAREMEKPTL KKIDSVAEIV LGESLSSRGL
KEKMVKEALN PFSNVEIRKI AGGPAPEEMR NYLSKRQTEL ELNRQEIATL KDITDSAFEN
LLATVNEYRQ A