| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A0003 |
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| Symbol | |
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| ID | 3627589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2107 |
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| End bp | 3381 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637698896 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit D |
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| Protein accession | YP_303576 |
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| Protein GI | 73667561 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00519] L-asparaginases, type I
[TIGR02153] glutamyl-tRNA(Gln) amidotransferase, subunit D |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.365888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTCA AACAGGGCGA TCGGGTACGT ATTGAAAAGA ACGGCACTGT CTACGAAGGT
AAAGTGATGC CGTCCATGGA AGGATATATT ACAATAAAAA TGAACAGCGG TTACAATGCC
GGTTTTTCCA TGGATAAGGT AAAGATAACT CTTCTGGAAA ACAATGGTGA AAACACAAAT
GGAGGCCTGA ACGGCGGAAA AGAACATAAA ACGGCAGGAG AGGAGGTCCA GAAATCTGGA
AAAAAGCTTC CAAAGGTTGC TATTCTTTCC ACAGGCGGAA CGATTGCAAG CAAAATCGAT
TACAGGACGG GTGCAGTAAC TTCCCAGTTT ACTGCTGACG ATATCCTTGC AGCTATCCCT
GAACTCAGAG AGATAGCTGA TTTCAAAGGC AGGGTAATCT CAAGCATTCT CTCGGAAAAC
ATGGATTCGG AGTCCTGGCA AAACCTTGCA CGTGCCATCG TAGAGGAAAT CGAGGCAGGT
GCCGATGGAG TAATCGTAAC CCACGGGACA GACACCATGA TGTACACGGC TGCAGCCCTT
TCCTTTATGA TTGAAACACC TGTGCCCATC GTTATTGTAG GTTCCCAGAG AAGTGCAGAC
CGTCCGAGCA GTGACAATGC CATGAATGCA ATATGTGCGG CCCTTGTTGC TATTAGTGAT
ATTGCTGAAG TTTCGGTTGT TATGCATGGA ACAACCTCAG ATGATTTCTG TGAGATCCAC
CGTGGAACTA AAGTCAGGAA AATGCATACT TCCCGCAGAG ATGCCTTCAA GTCAATAAAT
TCCCGACCTA TAGGAATCGT GGATTACAAT ACAAGAAAAA TAAAAACTTT CATTGACTAT
ATCAAACGTG GAGAAAGACC TCTCAAATTC AATCCAGGCA TGGAACCGAA ATGTGCTCTT
GTTAAATTCA CTCCCGGTTC AGGTCCTGAA ATCCTTGACC ATTACATTGA CAGCGGGTAC
AGAGGACTGG TTCTCGAAGG TACTGGGCTT GGGCATGTGT CTACAAAATG GATTCCCAAG
ATTCAGAAAG CAACAGATGC AAAAATGCCT GTTATAGTTA CGTCTCAGTG CCTTAATGGC
AGAATCTGCG ACCGCGTCTA TGATACTGGC CGTGATATGC TGAAAGCCGG TGCAATCGAA
GGAGAAGATA CCCTGCCTGA AATCGCCCTT GTTAAACTTA TGTGGGTGCT CGGTCAGACC
GATGAATTTA ACGAAGCTGT CAAAATGCTC AGGGAAGATA TCAGTGGAGA GATTACAAAG
TGCTGTTTTA AGTAA
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| Protein sequence | MEFKQGDRVR IEKNGTVYEG KVMPSMEGYI TIKMNSGYNA GFSMDKVKIT LLENNGENTN
GGLNGGKEHK TAGEEVQKSG KKLPKVAILS TGGTIASKID YRTGAVTSQF TADDILAAIP
ELREIADFKG RVISSILSEN MDSESWQNLA RAIVEEIEAG ADGVIVTHGT DTMMYTAAAL
SFMIETPVPI VIVGSQRSAD RPSSDNAMNA ICAALVAISD IAEVSVVMHG TTSDDFCEIH
RGTKVRKMHT SRRDAFKSIN SRPIGIVDYN TRKIKTFIDY IKRGERPLKF NPGMEPKCAL
VKFTPGSGPE ILDHYIDSGY RGLVLEGTGL GHVSTKWIPK IQKATDAKMP VIVTSQCLNG
RICDRVYDTG RDMLKAGAIE GEDTLPEIAL VKLMWVLGQT DEFNEAVKML REDISGEITK
CCFK
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