| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0540 |
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| Symbol | |
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| ID | 3617962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia canis str. Jake |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007354 |
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| Strand | + |
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| Start bp | 789933 |
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| End bp | 790904 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 637698486 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_303174 |
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| Protein GI | 73667158 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.373783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAA AAAAAATCTT TATTAAAATT GAAGAAGCAA ATAATAGATT AGACAAGCTC
ATAGCAAATA AATTAAATAC ATCTCGTAAT CAGGTACAAC AATTAATAAA AGATAGTAAA
GTTTCTTTGT TTAATAACAT AATAACAGAC AATAATCACA CAACAAAAGT AAATGATATA
TATATAATAA ATATACCAAC AAAAGAAATT AGTAACACAA TTATTCCAAA TCATTCAATA
CCAATTTCAG TTCTATATGA AGATCATGAT ATCATCATCA TCAATAAAAC CTCTGGAATA
ACTGTACACC CAGGAGCAGG GACAAAAAAT AACACACTAG TTAATGCCTT AGTTGCACAT
TATGGTAATG CTTTAAGTAC TGTAGGAAAA GCAACACGAC CAGGAATAAT TCATAGATTA
GATAAGGATA CTAGTGGATT AATGGTAATT GCAAAAAATG AAAAATCATA TTATTTTCTA
TCAGAATTAT TACTAAAAAA ACAAATAAAA AAAGAATATT TAGCAGTAGT GTGGGGATCA
CCTAATCCTA AAAATAACAC TATACAAAAC TATATCTGTG TTAAACCAAA TAATAAACAA
ATGATGGCTG TTACACATCT ATCACATAAA GGAAAGTTAG CCATTACAGA ATACAAAACT
AAACAAAACT TTAGTAACAT AGCAAGTTTA ATAAAATGTA GAATACATAC AGGAAGAACA
CACCAGATAC GTGTACATAT GAGTCATATA GGAAATTCTA TAATAGGAGA TCAAAAATAC
GGAAAAAATA ACAGTAAAAT TACAAAATAT GCTAAACAAA GTACTATTAT CAACACATTA
AAACGACAAG CACTACATGC ATATAAATTA GGCTTTATTC ATCCCACAAA AAACACATAT
ATAGAGTTTC GCGCTGACAT TCCTCATGAC ATCCAGACAT TAATTAATGA ATTAGAACAA
CTAAGTAAAT AA
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| Protein sequence | MLEKKIFIKI EEANNRLDKL IANKLNTSRN QVQQLIKDSK VSLFNNIITD NNHTTKVNDI
YIINIPTKEI SNTIIPNHSI PISVLYEDHD IIIINKTSGI TVHPGAGTKN NTLVNALVAH
YGNALSTVGK ATRPGIIHRL DKDTSGLMVI AKNEKSYYFL SELLLKKQIK KEYLAVVWGS
PNPKNNTIQN YICVKPNNKQ MMAVTHLSHK GKLAITEYKT KQNFSNIASL IKCRIHTGRT
HQIRVHMSHI GNSIIGDQKY GKNNSKITKY AKQSTIINTL KRQALHAYKL GFIHPTKNTY
IEFRADIPHD IQTLINELEQ LSK
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