| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0468 |
|---|
| Symbol | nusA |
|---|
| ID | 3618036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | - |
|---|
| Start bp | 683303 |
|---|
| End bp | 684856 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637698412 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_303103 |
|---|
| Protein GI | 73667087 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAATC TACAGAATTT TGATAACTTA GAATTAATAA GGGTGGCTAA GGATATTGCT
GACCAAAAAG GCTTAAATTT GGATATAATA ATAAGGGCTA TAGAAGAAGC TATTCAATTA
ACTAGCCGCA GTAAGTATGG AAATTGTAAG ATTAAAGTTA CAGTAGATAG AAAAACTGGT
GTTGTGTCAA CTTATAGACA AGTATTAGTT ATTAATGATA ATGGTGAAAT TGTTATTCCT
GAAAATAAGA AAAGTGAAAT AGATTCTTCT GATATAAGCA AATATAAGTT GATTACTTTA
ACGGAAGCTA AGCAAATTGA TGAAAATGCT GAGGTTGGAG ATATAATGCT AGAGCATTTA
CCTGTTATTG ATCTTGATTA TAGTTCTGCT AAGATTGCAA AGCAAAAAAT TGCTCAAGTT
ATTATATCAG AAGAGCGTAA AAAGCAATAT GAAGATTTTA AAGATCGTAT AGGTGATATT
GTTTATGGTA CTGCTAAACG TATAGAATAT AATAATGTTA TTGTAGATTT AAATGGAAAT
GAAGGTTATT TATCAGCTGC AAATTTAATA AAAGGTGAAG TATTTCGTGT TGGAGACAGA
GTAAAAGCAC ATATAGAGGA TGTAAGAAAA GAAAATTCAG GACCTCAAAT ATTTCTTTCA
AGAATAAGTA AAGGATTTAT GGAACAATTG TTCAAGCAAG AAATTCCAGA AATATATGAT
GGAATAGTGA CAATTAAGGC AATAGCGAGA GATCCAGGAT CTAGGTCAAA GGTTGCTGTT
TTTTCTTCAG ATAAAAATAT TGATCCAGTT GGTGCGTGTG TTGGTGCAAG AGGTGTAAGG
ATTCAGAGTA TTATTTATGA ATTGCATGGT GAGAAAATTG ATGTAATTTT ATATTCTCCA
GAACTTGCTA AATTTATAGT TAATGCTATA GCTCCAGCAG AGGTTTTAAA GGTTATTATT
GATGAAGATA AAGAAAAAGT AGAATTAATC ATTCCTGAAA ATCAGCTAAG TTTAGCAATT
GGTAGATATG GACAGAATAT TAGATTAGCA TCGGAATTGA TTGGTTGGAA AATAGATGTA
ATAGGTGATG AAACTGAATC TAGTAGAAAA GCAAAAGAAT TAAGTGAAGG ATCAAAAATA
TTTGTTGAAG GGTTAGATGT TGAGGAAATA ATAGGACAAT TATTGTTTAC TGAAGGATTT
GTTAGTATTG AGGATATAGA TCAAGCATCT GTTAGTGATA TTGCTGCAAT AGATGGGTTT
AATGAAGAGA TAGCAGAAGA GTTAAAAAGT AGAGCAGCTG ATTATTTGAC GCGTAAAGAT
GCTGAAATAA AGCAAATTTT AGATAATTTA TCAGTTGATA AGGATGTTAC TACTTTGCCA
TTTTTAAAAC CAAGTGATAT TATAGCATTG TCTGAGAATG GTATTAAAAG TCTTGAAGAT
ATTGCTGGGT TATGTACAGA TGAATTTTTC GATATTGTTC CTAATATTGC GTTAACTAAG
GATCAAATTG ACTCTGTTAT ATTAGAGTCT CGTAAAAAAA TAGGATGGTT ATAA
|
|---|
| Protein sequence | MVNLQNFDNL ELIRVAKDIA DQKGLNLDII IRAIEEAIQL TSRSKYGNCK IKVTVDRKTG
VVSTYRQVLV INDNGEIVIP ENKKSEIDSS DISKYKLITL TEAKQIDENA EVGDIMLEHL
PVIDLDYSSA KIAKQKIAQV IISEERKKQY EDFKDRIGDI VYGTAKRIEY NNVIVDLNGN
EGYLSAANLI KGEVFRVGDR VKAHIEDVRK ENSGPQIFLS RISKGFMEQL FKQEIPEIYD
GIVTIKAIAR DPGSRSKVAV FSSDKNIDPV GACVGARGVR IQSIIYELHG EKIDVILYSP
ELAKFIVNAI APAEVLKVII DEDKEKVELI IPENQLSLAI GRYGQNIRLA SELIGWKIDV
IGDETESSRK AKELSEGSKI FVEGLDVEEI IGQLLFTEGF VSIEDIDQAS VSDIAAIDGF
NEEIAEELKS RAADYLTRKD AEIKQILDNL SVDKDVTTLP FLKPSDIIAL SENGIKSLED
IAGLCTDEFF DIVPNIALTK DQIDSVILES RKKIGWL
|
|---|
| |