Gene Ecaj_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcaj_0018 
Symbol 
ID3618233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEhrlichia canis str. Jake 
KingdomBacteria 
Replicon accessionNC_007354 
Strand
Start bp19831 
End bp22002 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content33% 
IMG OID637697950 
Producttype IV secretion system component VirD4 
Protein accessionYP_302667 
Protein GI73666651 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3505] Type IV secretory pathway, VirD4 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.512537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGTA TAAGTGCAAA TCACATACGC AATATTTTAT TCCTTGTTTT AGGCGCATTT 
TTTGGACTGG AATTTTGCTT TTATTTATCA GGTGTATTAT TCATCTTAAT GGTCTGGGGA
CCAAATTACC TAGATTTTAA TGCTATAAAT CCCAGTTTGA GTGATTTTCC AGACAGAATT
TGGCCAACTA TTTTTGACTA TGTACAACAT TGGTGGAAGA ACCCTTCTGC ATACGATGCA
GTTTTATTAC TTAAGCTAAT AACGTCATTA TGTACACCAG TAGGTATTCT AAGCATAGTA
TTATGGAACC TTAGAAATAT ATTATTCGAT TGGAGGCCAT TTAAGAAGAA AGAATCACTG
CATGGAGATT CAAGATGGGC AACAGAAAAA GATATTCGCA AAATAGGATT ACGTAGTAGA
AAAGGAATAT TATTAGGGAA AGACAAGAGA GGATATCTCA TTGCAGATGG ATATCAACAT
GCATTGTTAT TTGCACCAAC TGGATCCGGA AAAGGTGTAG GTTTTGTAAT ACCAAACTTA
TTATTCTGGG AAGATTCTGT AGTAGTACAC GATATAAAAT TAGAGAACTA TGATCTTACA
AGTGGGTGGA GAAAAAAAAG GGGACAAGAA GTTTTCGTGT GGAACCCAGC ACAACCTGAC
GGTATAAGTC ACTGTTACAA CCCATTAGAT TGGATAAGCT CTAAGCCTGG ACAAATGGTA
GATGATGTAC AAAAAATTGC CAATCTAATA ATGCCTGAAC AAGATTTTTG GTATAACGAA
GCACGTAGTT TATTTGTAGG AGTAGTATTA TACTTACTAG CAGTACCAGA AAAAGTAAAA
TCCTTTGGAG AAGTTGTAAG AACAATGCGC AGCGATGACG TAGTCTACAA CTTAGCAGTA
GTACTAGACA CAATAGGGAA AAAGATTCAC CCAGTTGCAT ACATGAATAT AGCTGCATTT
TTACAAAAAG CAGACAAAGA ACGCTCAGGT GTTGTATCAA CTATGAACTC ATCTTTAGAA
TTATGGGCAA ACCCATTAAT AGATACAGCA ACAGCATCAA GTGATTTTAA TATTCAAGAA
TTTAAAAGGA AAAAAGTAAC AGTATATGTT GGATTAACAC CAGATAATTT AACTCGTCTT
AGACCTTTAA TGCAGGTATT TTATCAACAA GCTACAGAAT TTTTATGTAG AACTTTACCA
TCAGATGATG AACCATATGG TGTACTGTTC TTAATGGATG AGTTTCCAAC ATTAGGAAAA
ATGGAGCAAT TTCAAACAGG TATCGCATAT TTCCGTGGAT ATAGAGTTAG ACTATTTTTG
ATTATTCAAG ATACTGAACA GCTTAAGGGT ATATATGAAG AAGCAGGAAT GAACTCATTC
TTATCAAACT CTACTTATAG AATAACTTTT GCTGCAAATA ATATAGAAAC TGCAAATTTA
ATATCACAGT TAATAGGAAA TAAAACTGTT AACCAAGAGT CTTTAAACAG ACCTAAATTT
TTAGATTTGA ACCCTGCATC ACGTTCATTA CATATATCAG AAACACAAAG AGCTTTACTA
TTACCTCAAG AAGTAATAAT GTTACCCAGA GATGAGCAAA TACTTTTAAT AGAATCTACT
TATCCTATAA AATCAAAGAA AATAAAATAC TATGAAGACA AAAATTTTAC AAAAAAACTA
TTAAAGAGTA CCTTTGTTCC AACTCAAGAG CCTTATGATC CCAACAAAAC AAAAACAGCA
ACAAAAGAAA ACGAAGAACC TATGCCAAGT ATTGAAAGCG ATCTTCCTAA AAATACATCT
GACAATACTG AAAACAATAT GGAAGATGGT GCAATGTACA GCAGCATAGA AGAAGATTAT
GACGATGATG ATGATGATTT TAATTTTGAA GACTTAGATG AATATATGGA TGAAGAAGAA
GATTATGATG ATGAAGAATA TGATGATATA GATTATGATG ATAATAACAA TAGTAATGAG
GAGTATGAAG AAGATAATCC AGAAGAAGAT GACAATAGCA ATAATCTAGA CGATGAGGAA
GAGGAAGAAG ATAATATTAT AGATTATGAA GATGAAGAAG AATATGATGA TAACATAGAC
TACAAAGATG ATGACAATAA CTACAACAAA GATACCACTG ACGATCAAGA CTCAAAAAAA
CATAATGAAT AG
 
Protein sequence
MDSISANHIR NILFLVLGAF FGLEFCFYLS GVLFILMVWG PNYLDFNAIN PSLSDFPDRI 
WPTIFDYVQH WWKNPSAYDA VLLLKLITSL CTPVGILSIV LWNLRNILFD WRPFKKKESL
HGDSRWATEK DIRKIGLRSR KGILLGKDKR GYLIADGYQH ALLFAPTGSG KGVGFVIPNL
LFWEDSVVVH DIKLENYDLT SGWRKKRGQE VFVWNPAQPD GISHCYNPLD WISSKPGQMV
DDVQKIANLI MPEQDFWYNE ARSLFVGVVL YLLAVPEKVK SFGEVVRTMR SDDVVYNLAV
VLDTIGKKIH PVAYMNIAAF LQKADKERSG VVSTMNSSLE LWANPLIDTA TASSDFNIQE
FKRKKVTVYV GLTPDNLTRL RPLMQVFYQQ ATEFLCRTLP SDDEPYGVLF LMDEFPTLGK
MEQFQTGIAY FRGYRVRLFL IIQDTEQLKG IYEEAGMNSF LSNSTYRITF AANNIETANL
ISQLIGNKTV NQESLNRPKF LDLNPASRSL HISETQRALL LPQEVIMLPR DEQILLIEST
YPIKSKKIKY YEDKNFTKKL LKSTFVPTQE PYDPNKTKTA TKENEEPMPS IESDLPKNTS
DNTENNMEDG AMYSSIEEDY DDDDDDFNFE DLDEYMDEEE DYDDEEYDDI DYDDNNNSNE
EYEEDNPEED DNSNNLDDEE EEEDNIIDYE DEEEYDDNID YKDDDNNYNK DTTDDQDSKK
HNE