| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Reut_B5548 |
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| Symbol | |
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| ID | 3613403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia eutropha JMP134 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007348 |
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| Strand | + |
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| Start bp | 2353335 |
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| End bp | 2355311 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637694973 |
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| Product | helix-turn-helix, Fis-type |
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| Protein accession | YP_299737 |
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| Protein GI | 73539370 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.541303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGC GGCAACGCGA TCACATCGAG ACGGTAGTCC AGGCCACCAG CTACCTGCCC
CCGCCTGCCT TGCCCGCGGA CCGGCCCACG CACGACGCCG TGATCCAGAA TTCATGGCGG
CGCTGCGTGC ACCAGTACGG ACTGGATCCT TCGCGCATGC AGGAAGCGCG CATCCTGCCG
CAGACACGCC TGCGCGAGCA CCAGCAACGC ATCGACGATT TCGCGCGCAT TGCGCGTCAT
GGGCTGGAAA GCCTGTATGC GCAGGTGGCA GGGCTGGGCT ACGTGGTGCT GCTGACCGAC
GCGCAGGGCG TGACCGTTGA CTACATCGGC GACGCGCGTA CCGATACCGA TCTGCGCCAC
GCCGGCCTGT ACCTGGGCGC GGAATGGAGC GAGAGCGGAG CCGGCACCTG CGCGGTCGGC
ACGGCGCTGG TCACTGGCGA AGCACTGACC GTGCATCAGG CCGACCATTT CGACGCCACG
CATATTCCGC TCACTTGCAC GGCGGCGCCG CTGTTCGACT CGCGCGGAAA TCTCAGTGCG
ATCCTCGACA TTTCCGCGCT GACTTCGCCG CATGCCAAGG AGAGCCAGGG CCTGGCGCTG
CAGATGGTGC GCATCTATGC GGCGCATATC GAGAATGCGA ACTTCCTGCG CGTGCATCAT
CGCGACTGGA TCCTCAAGCT CAACGTGGCG CCTGAGTTTG TCGACGTGAA TCCGGAATAC
CTGCTCGCGC TCGACGACTG CGGCCGCATC GTCGGGCACA ACCACCGCGC GCGGCGCATG
CTGGAAGGGG AGCTATCCAC TGGCACGGTG CTCGGCCAGT CGTTCGAGAC GCTGTTCAAC
GCGCGGCTGG AAGACCTGAG CCGCTATGTC TACTCGCGCC CGAGCGAGCA GCGGCTCGTC
GCGCTGAACC GCAGTGGGGG GCTACTCTAT CTGAGCGTGA TGCCGCCCGC GCTGCGCTGG
CAGGCCGGCG CCCGCGAAGA ACGCCTCGCG CCGTTGCCAG AGCCGCTCGC GGCATTGTGT
GGCGGCGATG CCGCGCTGCA GCAGCAATTG CAGCGCGCGG CGCGCCTGGT CGATTCGCCG
ATCAACCTGC TGATCAATGG CGAGACCGGC AGCGGCAAGG AGTACTTCGC CAAGGCGCTG
CATCAGGCGA GCGCCCGGCG CGGCCAGCCG TTCGTTGCAG TGAACTGCGC TGCGATTCCT
GAAACGCTGA TCGAAAGCGA GCTGTTCGGC CACCTGCCCA ACAGCTTCTC GGGGGCCGGT
CCGCGCGGCA AGCGCGGGTT AATCCAGGAA GCCGACGGCG GCACGCTGTT CCTCGACGAG
ATCGGCGACA TGCCGCGCGA GCTGCAGTCG CGTCTGCTGC GCGTGCTGGC CGAGGGCGAG
GTCTTGCCGA TCGGTGCGGC ACGCCCGATA CCGGTCAGGC TGCGCGTGAT TTCCGCCACG
CATCATCGGC TGGAGGATCT GGTCGCGCAA GGACGCTTCC GCGAAGACCT GTTCTACCGG
CTCAACGGCG CGCGCTTCGC GCTGCCACCG CTGCGCGAGC GCACGGACCT TGACTGGCTA
GTGCAGAAGA TGCTCGACGC TGGCGGCCAG CGCGGCATCG CGCTGTCGCC GCAGGCGCGC
GAACAGCTTT GCCGCCATCG CTGGCCCGGC AACTTGCGTG AATTGCGTAA CGTGCTCGAG
TACGCGCGTG CGGTCTGCTC GGACGGCTAC ATCGATCTGC ACGACCTTCC CGATGCCCTT
GGCGCTCCTG CGGCAATGAC AGCCGTGCAG GCGCTACCCG CGCAAGAGCA AGAGGGCGAC
ACTAAGGCGA TGCCGCCGGA AGCCATGCTG CTGATGCAGT ACCTGCGCGC GTCGGGCTGG
AACCTGAGCG CGGTAGCGCG CCAGATCGGC ATCAGCCGCA TGACGCTGTA CCGCCGCATG
GAGCGCTACG GCATCCAGTC TCCGAACCGC CGCGATGGCG AAGGGCCGCT GCAGTAG
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| Protein sequence | MDLRQRDHIE TVVQATSYLP PPALPADRPT HDAVIQNSWR RCVHQYGLDP SRMQEARILP
QTRLREHQQR IDDFARIARH GLESLYAQVA GLGYVVLLTD AQGVTVDYIG DARTDTDLRH
AGLYLGAEWS ESGAGTCAVG TALVTGEALT VHQADHFDAT HIPLTCTAAP LFDSRGNLSA
ILDISALTSP HAKESQGLAL QMVRIYAAHI ENANFLRVHH RDWILKLNVA PEFVDVNPEY
LLALDDCGRI VGHNHRARRM LEGELSTGTV LGQSFETLFN ARLEDLSRYV YSRPSEQRLV
ALNRSGGLLY LSVMPPALRW QAGAREERLA PLPEPLAALC GGDAALQQQL QRAARLVDSP
INLLINGETG SGKEYFAKAL HQASARRGQP FVAVNCAAIP ETLIESELFG HLPNSFSGAG
PRGKRGLIQE ADGGTLFLDE IGDMPRELQS RLLRVLAEGE VLPIGAARPI PVRLRVISAT
HHRLEDLVAQ GRFREDLFYR LNGARFALPP LRERTDLDWL VQKMLDAGGQ RGIALSPQAR
EQLCRHRWPG NLRELRNVLE YARAVCSDGY IDLHDLPDAL GAPAAMTAVQ ALPAQEQEGD
TKAMPPEAML LMQYLRASGW NLSAVARQIG ISRMTLYRRM ERYGIQSPNR RDGEGPLQ
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