Gene Reut_B5426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagReut_B5426 
Symbol 
ID3612981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia eutropha JMP134 
KingdomBacteria 
Replicon accessionNC_007348 
Strand
Start bp2215815 
End bp2216465 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content63% 
IMG OID637694851 
ProductOmpW 
Protein accessionYP_299615 
Protein GI73539248 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.73158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAGC TCTCTCTCCT GACCCGGGTC GCCTGTACTG CCATCGCCGC GTTTGCCATG 
TTCGGCGCCG TCTCCACGCC CGCCCTCGCC GCCGACGGCG AGACCCAGGG CAACTGGATG
GTGCGCCTGC GCGCCACGTA CCTCGACATG GCCGACAAGT CCGATGCCAT TCCCGCGCTG
GGCGTGCCGT CGGATGCCAT CACGGTCAAC AACAAGTGGA TTCCCGAGCT CGACGTCACC
TACTTCTTCA CGCGCAATAT CGCCGCGGAA CTGGTGCTGA CCGTGCCGCA GAAGCAGGAC
GTCTACCTGA ACGGCAACCG CATCGGCACC TTCAAGCACC TGCCACCCAC GCTGCTCGTG
CAGTACCACT TCCTGCCCGA AGGCACGATT CGTCCGTACG TGGGCGCCGG CCTGAACTTC
ACGCGCATCT GGGGCGCCGA CATCGCCAAC AACACGCTGC AGCTCGACAA CTGGAGCGTG
GCACCGGCGC TGCAGATCGG CATGGATTAC AAGCTGACCA AGAACTGGTT CCTGAACGCC
GACATCAAGA AGGTCTGGCT CGGCAGCGAC GTAAAGGCCG GCGGCGAGAA GATCTCGAAG
GTCAATCTGG ATCCGTGGCT GTTCAGCATG GGCGTGGGTT ACCGGTTCTG A
 
Protein sequence
MNKLSLLTRV ACTAIAAFAM FGAVSTPALA ADGETQGNWM VRLRATYLDM ADKSDAIPAL 
GVPSDAITVN NKWIPELDVT YFFTRNIAAE LVLTVPQKQD VYLNGNRIGT FKHLPPTLLV
QYHFLPEGTI RPYVGAGLNF TRIWGADIAN NTLQLDNWSV APALQIGMDY KLTKNWFLNA
DIKKVWLGSD VKAGGEKISK VNLDPWLFSM GVGYRF